Pairwise Alignments

Query, 349 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 645 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  113 bits (283), Expect = 1e-29
 Identities = 65/176 (36%), Positives = 99/176 (56%), Gaps = 8/176 (4%)

Query: 170 AIKLSEHKRALSALSRTDSLTGLLNHGSWKDLLHLKFHKCQQQQSHATIALIDIDHFKQI 229
           A+   EH       +  D LTGL N  +W + +  +    Q+   H  +A++D+DHFK+I
Sbjct: 471 ALGYREHLEEQRQKALLDPLTGLPNRAAWSERVEREMLDWQENGGHLAMAILDLDHFKRI 530

Query: 230 NDTHGHIVGDAVLRQLSLELRRNLRENDLAGRYGGDEFCVILPQMPMEQAAQVMERMRET 289
           ND +GH+ GD VL+ ++ +LR+ LR  D   R+GG+EF ++LPQ     AAQV E +R T
Sbjct: 531 NDNYGHLAGDKVLKIVADQLRKRLRGRDFIARFGGEEFVMLLPQTTPAVAAQVAEVLRAT 590

Query: 290 FS----NYRNPQIPELRVSLSIGLADFQPVFTDAAMWLNAADRALYAAKDTGRNRV 341
                 +++  ++    ++ SIGL  F+       + L  AD ALY AK+ GRNRV
Sbjct: 591 VEACPFHFKGERVV---ITTSIGLGAFRSGERSDQV-LKRADAALYRAKELGRNRV 642