Pairwise Alignments

Query, 600 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens GW456-L13

 Score =  367 bits (942), Expect = e-106
 Identities = 237/607 (39%), Positives = 324/607 (53%), Gaps = 22/607 (3%)

Query: 1   MSETLLSSRNLAFELYEVLDAEGL-TQRERFAEH-NRETFDAAISTARNIAEKYFAPHNR 58
           MS+     R++ F L EV     L  Q    A+  + ET  A +  A  I+ +  AP NR
Sbjct: 1   MSDYKAPLRDMRFVLNEVFQVSRLWAQLPGLADVIDEETAAAILEEAGKISGEVIAPLNR 60

Query: 59  KNDENEPRYEDGKAILIPEVKPAVDAFLEAGFLNAARSFEAGGMQLPTLLSQACFAHFQS 118
            +DE    + DG          A  AF E G++      + GGM +P  +S        S
Sbjct: 61  ASDEQGCTWNDGAVTAPDGFAQAYQAFAEGGWVGVGGDPQYGGMGMPKAISAQVEEMVNS 120

Query: 119 ANAASTSYPFLTMGAANLIESFGTDDQKRRFLQPMIDGRFFGTMALTEPHAGSSLADIRT 178
           A+ +   YP LT GA   I++  +++ K  +L  M  G + G+M LTE H+G+ L  IRT
Sbjct: 121 ASLSFGLYPMLTAGACLSIKAHASEELKAAYLPNMYAGTWTGSMCLTEAHSGTDLGLIRT 180

Query: 179 RAEPAADGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPAGVKGISLFIVPKFLVND 238
           +AEP ADG+Y++ G+KIFI+GG+H L+ENI+H+VLA+LPDAPAG KGISLF+VPK LVN 
Sbjct: 181 KAEPQADGSYKVSGSKIFITGGEHDLTENIIHLVLARLPDAPAGPKGISLFLVPKVLVNA 240

Query: 239 DGSLGERNDVLLAGLFHKMGWRGTTSTALNFGDNGHCVGYLVGQPHQGLSCMFQMMNEAR 298
           DGSLGE N +    + HKMG + + +  +NF       G++V  P++GL+ MF MMN  R
Sbjct: 241 DGSLGENNTLSCGSIEHKMGIKASATCVMNFDG---ATGWIVDAPNKGLAAMFTMMNYER 297

Query: 299 IGVGMGAVMLGYAGYLYSLEYARERPQGRLPDS---KDPATAPVSIIQHADIKRMLLTQK 355
           +GVG+  +  G   Y  ++EYAR+R Q R P     KD A  P  II H D++RMLLT K
Sbjct: 298 LGVGIQGLAQGERSYQNAVEYARDRLQSRAPTGAQFKDKAADP--IIVHPDVRRMLLTMK 355

Query: 356 SYVEGAFDLGLYAARLFDDTTTLETEAERKHAHELLDLLTPIVKSWPSEFCLKANELAIQ 415
           +  EG      Y A   D     E    R+ A +L+ LLTP+ K++ ++  L+      Q
Sbjct: 356 ALNEGGRAFSSYVALQLDIAKYSEDAPTRQRAQDLVSLLTPVAKAFLTDMGLETTLHGQQ 415

Query: 416 ILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGAGLKQLIRLIAE- 474
           I GGHGY RE+  EQ  RD R+  I+EGT+GIQSLDL GRK+  +GGA    L RL A  
Sbjct: 416 IFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQSLDLAGRKIVGSGGA----LYRLFASE 471

Query: 475 -TGARAQEYPSLTALREPLEQLVNRLQSVTISLLTDLAHGKVNSSLANSALYLKVFGHTV 533
                A     L    +PL   V+ L  +T  LL D A    N   A S  YL VFG+T 
Sbjct: 472 IRNFTANVGADLAEFIQPLNAAVDTLDDLTAWLL-DRAQNNPNEIGAASVEYLHVFGYTA 530

Query: 534 IGWRWLEQAIRAEEGFAKGNAADVAFYKGKLQAARYFLTWEVPSCHHELALLEARDDTCL 593
             + W   A    +    G+  D  FY  KL  AR++    +P  H   A  +A  D   
Sbjct: 531 YAYMWARMA----KAVMSGDGED-DFYTSKLATARFYFARLLPRIHSLSASAKAGSDCLY 585

Query: 594 GMQDEWF 600
            +Q + F
Sbjct: 586 ELQADQF 592