Pairwise Alignments

Query, 600 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 596 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase from Xanthobacter sp. DMC5

 Score =  374 bits (959), Expect = e-108
 Identities = 220/595 (36%), Positives = 331/595 (55%), Gaps = 10/595 (1%)

Query: 9   RNLAFELYEVLDAEGLTQRERFAEHNRETFDAAISTARNIAEKYFAPHNRKNDENEPRYE 68
           R++ F L+E+  +E L++ +   E + +  DA +  A     +  AP N+  D     YE
Sbjct: 9   RDMRFVLHELHGSEELSKLKGLEELSPDLIDAVLEEAGKFVTEVLAPLNQSGDLEGCTYE 68

Query: 69  DGKAILIPEVKPAVDAFLEAGFLNAARSFEAGGMQLPTLLSQACFAHFQSANAASTSYPF 128
           +G        K A  AF E G+   A   + GG  LP  +++       S N A    P 
Sbjct: 69  NGVVRTPKGFKEAYTAFREGGWNGIACDPKYGGQGLPASVNKLVEEMLCSGNLAFGICPG 128

Query: 129 LTMGAANLIESFGTDDQKRRFLQPMIDGRFFGTMALTEPHAGSSLADIRTRAEPAADGTY 188
           LT GA   ++++ +++ K RFL  M+DG + G+M LTEP  G+ L  +RT+AEP ADG+Y
Sbjct: 129 LTHGAYQALKAYASEELKERFLPKMVDGVWSGSMCLTEPQCGTDLGLVRTKAEPKADGSY 188

Query: 189 RLKGNKIFISGGDHPLSENIVHMVLAKLPDAPAGVKGISLFIVPKFLVNDDGSLGERNDV 248
           ++ GNKIFIS G+  ++ENIVH+VLA+LPDAP G+KGISLF+VPKFL  +DGS+G RN V
Sbjct: 189 KITGNKIFISAGEQDMTENIVHLVLARLPDAPKGIKGISLFLVPKFLPKEDGSVGPRNGV 248

Query: 249 LLAGLFHKMGWRGTTSTALNFGDNGHCVGYLVGQPHQGLSCMFQMMNEARIGVGMGAVML 308
           L  G+ HKMG  G+++  ++F +     G+LVG+PH+G+  MF MMN  R+ VG   + L
Sbjct: 249 LCTGIEHKMGIHGSSTCQMSFDE---ATGWLVGEPHKGMRAMFAMMNSERLSVGTQGLGL 305

Query: 309 GYAGYLYSLEYARERPQGR-LPDSKDPATAPVSIIQHADIKRMLLTQKSYVEGAFDLGLY 367
           G A Y  ++ YA+ER QGR L  +K P      II H D++R L+T ++Y EG   L  +
Sbjct: 306 GEAAYQAAVVYAKERLQGRALSGAKHPDKPADPIIVHPDVRRTLMTMRAYNEGCRALAGW 365

Query: 368 AARLFDDTTTLETEAERKHAHELLDLLTPIVKSWPSEFCLKANELAIQILGGHGYTREYP 427
            AR  D     E   E K A +   L+TPIVK+  ++   +A  + +Q+ GGHGY R++ 
Sbjct: 366 VARALDLMERAEDPEESKRAEDFTALMTPIVKALFTDLGFEATSMGMQVYGGHGYIRDHG 425

Query: 428 VEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGAGLKQLIRLIAETGARAQEYPSLTA 487
           +EQY RD R+  I+EGT+G+Q+LDL+GRKL  + G  L+     +        +  +L  
Sbjct: 426 MEQYVRDARIAMIYEGTNGVQALDLVGRKLPAHMGRYLRSFFHPVLNYMDAKLDDENLGP 485

Query: 488 LREPLEQLVNRLQSVTISLLTDLAHGKVNSSLANSALYLKVFGHTVIGWRWLEQAIRAEE 547
           L  PL +    LQ  T + + +        + A +  YL++FG   +G+ W+     AE 
Sbjct: 486 LITPLSKAFGALQLAT-AHIAEKGLKDPEEAGAAATEYLRLFGLVALGYMWVRM---AEV 541

Query: 548 GFAK--GNAADVAFYKGKLQAARYFLTWEVPSCHHELALLEARDDTCLGMQDEWF 600
            F K   N  D AFY  K+  AR+F+   +P        ++A   + + + +  F
Sbjct: 542 AFEKRVSNPDDAAFYDAKIVTARFFMEKLLPDVAALWGSIKAGKGSMMALDEAMF 596