Pairwise Alignments

Query, 389 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 406 a.a., putative Efflux transporter from Pseudomonas putida KT2440

 Score =  275 bits (704), Expect = 1e-78
 Identities = 153/385 (39%), Positives = 236/385 (61%), Gaps = 4/385 (1%)

Query: 8   IRRLMICSLTIVISRAMTSPLMTLLLSRRLGLNQQDIGLLMGIAVFTATLMGLYGGYVID 67
           +  L++ SL    S+ + SPLM LLL+ R GLN    G L+GI++  ATLM L  G + D
Sbjct: 16  LHSLLLGSLLHDASKGIASPLMVLLLTTRFGLNSWQTGALLGISMLLATLMSLPAGLLFD 75

Query: 68  RMEKRKLLILAMLSSSIGFLLLTFATNLYLTTLTLVITESASALFLIGSKAIISENLPVE 127
           R  +  L  + +L  ++   LL FA  + L +L LV  E A+ALF IG KA++++ + V+
Sbjct: 76  RFARLHLATITLLLMTLAVGLLPFAQIILLVSLLLVFMEFAAALFGIGLKALLADFVSVK 135

Query: 128 QRAKVFSLRYTLTNIGYATGPMVGVVIAGQMPLLPFMLSSAI--AFISVFLMIGIPPTQR 185
           QR   FS RY LTN+ +A GP++GV +A     L  ++++    A + V + +G    Q 
Sbjct: 136 QRVSAFSYRYILTNVAFAIGPVLGVRLAEVSLTLALLVAAGACGAAMVVMMCLGASQGQP 195

Query: 186 EESSKP--LSFLTTLKTLRNDRSLVLFTGGSLLSTIVHGRYTLYLSQFLLVIHNPDDALK 243
             S K    S    LK L NDR+LVL+T GS  +T+VHGR+T +LS +LL  +  +  ++
Sbjct: 196 RTSLKTGAPSLADALKVLGNDRNLVLYTLGSFFNTVVHGRFTFFLSLWLLYQYPANQGME 255

Query: 244 ILSAVLACNAITVMVLQYQIGRFLKREQLRYWILLGTALFIGGLIGFSQADSLLSWCVAM 303
           +LS +L  NAITV+ LQ  + R++  E L   +++G  LF  GL+GFS ++ L +WC++M
Sbjct: 256 MLSWLLLTNAITVIALQRLVSRYITLETLNSRVMMGALLFSIGLLGFSVSEQLTAWCLSM 315

Query: 304 FVFTLGEMIIFPSEFLFIDTLAPESLRGSYYGAQNLAAFGGALSPVICGYLLINSPPTTM 363
            VFTLGE++I P+E+L+ID+++P  L+GSY+ A NLA+ G A+SP  CG++L  + P  +
Sbjct: 316 LVFTLGELLIQPAEYLYIDSISPPPLKGSYFAAHNLASLGAAVSPAWCGFILSLAGPQGL 375

Query: 364 FYALAGLTAAGGALCFLSGRRVAGS 388
            ++L     AG +LC +  R   G+
Sbjct: 376 CFSLIACVLAGSSLCAMRPRLTPGN 400