Pairwise Alignments

Query, 273 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 250 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  100 bits (248), Expect = 4e-26
 Identities = 73/251 (29%), Positives = 123/251 (49%), Gaps = 13/251 (5%)

Query: 8   TLLAGLLASSAVFAALPAAIKDKGEISAAIVPNYPPMDFKDPATNTLTGFDFDLGNALAE 67
           TL+A  L+  A F     A      +  A    +PPM+F +    T  GFD +L  A+ +
Sbjct: 6   TLVAAALSGFAFFGLAGMAQAQGEPLRVATDATFPPMEFVENGKRT--GFDVELVEAIGK 63

Query: 68  RLGVKIKWQETGFEQMLSGLTTKRVDIVLSGMTDTAERQKSVTF-IDYFSSGPQLYTMAK 126
            LG KI+W +  F+ ++ GL +KR D+ +SG+  T ER+K V F + Y++ G  +     
Sbjct: 64  TLGRKIEWIDIDFKGLVPGLISKRFDMAVSGIYITDERKKVVDFTVPYYAGGLVVMVKDG 123

Query: 127 REDLKELTDLCGKKVGTSRRTTWPSEIAAWSKENCEAAGKPAIVVIGTEGSADARAQLQQ 186
              +K   D+ GKKV     T    +  +++KE       P + ++  E + +    +  
Sbjct: 124 NTAIKTPADINGKKVSVQVGT----KSVSYTKEKF-----PQVQLMEVEKNQEMFNLVDI 174

Query: 187 NRLDAAMQGSETIPYLMSLDKGKYKPVGLAISKQFTGLGIEKSNTQLVTAISEALQGMID 246
            R DAA+ G +   Y     +G  K +   I+ +  G+ I K   +L  A++ A++ +  
Sbjct: 175 GRADAAVTG-KPAAYQYVRTRGGLKVLPEQITTEEYGMAIRKDTPELTKAVNGAIEKLKA 233

Query: 247 DGTYGKILKKW 257
           DGTY +I+KKW
Sbjct: 234 DGTYDQIVKKW 244