Pairwise Alignments

Query, 292 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 505 a.a., amino acid ABC transporter ATPase from Pseudomonas simiae WCS417

 Score =  145 bits (365), Expect = 2e-39
 Identities = 87/225 (38%), Positives = 130/225 (57%), Gaps = 11/225 (4%)

Query: 59  EWSYIGQFLTSEAILWGLVNTII-MSVLAMALGVVIGVITAIMRMSANPILRYVAITYTW 117
           +W+Y+   L  +A  W    T+I +S L   L + +G + A+ + S + +L   A  Y W
Sbjct: 4   DWNYMFGLL-GDAEFWRATWTVIKLSTLTWVLSIGLGFLLALAKQSRHGLLSVPARGYIW 62

Query: 118 LFRGTPLILQLLLWFNLALIFPVIAIPGLFSIDTVDLMTPFVAALLGLSINQGAYTAEVV 177
           LFR  PL++ L+  +NL       A+PG  +I    L  PF + LL L I + AY AE+ 
Sbjct: 63  LFRSLPLLVLLIFIYNLPQ-----ALPGTSAI----LADPFWSGLLALVICETAYVAEIH 113

Query: 178 RAGLLSVDTGQYEAAKSIGMPSLQALRRVILPQAMRVIIPPVGNEFISMVKMTSLASVIQ 237
           R GLLS+  GQ EAA+++G+       RV++PQA+RV +P + NE+IS+VK+TSL SVI 
Sbjct: 114 RGGLLSIPKGQAEAARALGLKFFGTQWRVVIPQALRVALPSLANEYISIVKLTSLVSVIS 173

Query: 238 YSELLHNAQNIYYANARVMELLIVAGIWYLAVVTVLSFGQSRLER 282
            +E+L   Q +Y  N  V+E +     +Y+ +VTV  F   RLER
Sbjct: 174 LTEILMVGQRLYSQNFLVIETMAAVAFFYVFIVTVFDFLLKRLER 218