Pairwise Alignments

Query, 292 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 258 a.a., polar amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  181 bits (460), Expect = 1e-50
 Identities = 100/237 (42%), Positives = 147/237 (62%), Gaps = 13/237 (5%)

Query: 55  NGQIEWSYIGQFLTSEAILWGLVNTIIMSVLAMALGVVIGVITAIMRMSANPILRYVAIT 114
           N  + W Y+ Q   S   L GL  T +++V AM LG V+G+  A++R+S NP+L      
Sbjct: 4   NWDVFWQYLLQ--PSGVYLTGLWLTCLIAVSAMLLGCVLGLAAALLRLSKNPLLHLPVRF 61

Query: 115 YTWLFRGTPLILQLLLWFNLALIFPVIAIPGLFSIDTVDLMTPFV-----AALLGLSINQ 169
           Y WL RGTPL++Q++       ++  +A  G+F  + +DL    V     AA++ L +N+
Sbjct: 62  YVWLMRGTPLLVQIVF------LYTALAAGGIFRFEDIDLFGLVVPGNIQAAIIALGLNE 115

Query: 170 GAYTAEVVRAGLLSVDTGQYEAAKSIGMPSLQALRRVILPQAMRVIIPPVGNEFISMVKM 229
           GAY AE++RAG+ +VD GQYEA +S+GM   + +RR++LPQA RVI+PP+GNEF  M+K 
Sbjct: 116 GAYMAEIIRAGIGAVDKGQYEAGRSLGMGFAKLMRRIVLPQAFRVIVPPLGNEFNVMLKN 175

Query: 230 TSLASVIQYSELLHNAQNIYYANARVMELLIVAGIWYLAVVTVLSFGQSRLERRFAR 286
           T+L SVI   ELL + Q +  A  RV EL +V  I++L + T+  F Q  LE RF +
Sbjct: 176 TTLVSVIGVQELLLSTQMVTSATFRVFELYLVVAIYFLMLTTLWGFFQRWLEARFGQ 232



 Score = 24.3 bits (51), Expect = 0.003
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 27  HVPRRYYGRMFFATLIVIVLAALLRAFANGQIEWSYIGQFLTSEAILWGLVNTIIMSVLA 86
           H+P R+Y  +   T +++ +  L  A A G       G F   +  L+GLV    +    
Sbjct: 56  HLPVRFYVWLMRGTPLLVQIVFLYTALAAG-------GIFRFEDIDLFGLVVPGNIQAAI 108

Query: 87  MALGVVIGVITA 98
           +ALG+  G   A
Sbjct: 109 IALGLNEGAYMA 120