Pairwise Alignments

Query, 261 a.a., ABC transporter for L-Arginine, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  306 bits (783), Expect = 4e-88
 Identities = 157/258 (60%), Positives = 188/258 (72%), Gaps = 2/258 (0%)

Query: 1   MKKLVLLGALALSVL-SMQAFAEGKPLKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCE 59
           MKK  L+  LAL +L S  A A  K L+IGIEAAYPPFASK  +G IVGFDYDIGNALC 
Sbjct: 1   MKKRSLITVLALGLLASSHAMAAEKTLRIGIEAAYPPFASKTEEGKIVGFDYDIGNALCA 60

Query: 60  EMKVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTNRYYLTPARLVLKEG 119
           +MKVKC WVE EFDGLIP+LKV+KID  LSSM+I +DRKKSVDFT++YY T +RLV+KEG
Sbjct: 61  QMKVKCVWVEGEFDGLIPSLKVKKIDMALSSMTINEDRKKSVDFTHKYYFTSSRLVMKEG 120

Query: 120 TAVSDSLDELKGKKIGVQRGSIHDRFAKEVLAPKGATIVPYSSQNEIYLDVEAGRLDGTV 179
             V D    LKGK IGVQR +  DR+A EV  PKG  +  YS+  EIY+D+ AGRLD   
Sbjct: 121 AVVDDQYASLKGKTIGVQRATTTDRYATEVFEPKGINVKRYSNNEEIYMDLAAGRLDAIF 180

Query: 180 ADATLLQEGFLDTPAGKGYAFTGPAFTDAKYFGDGIGIAVRKGDKENLDRINAAIAAIRA 239
           AD   L + FL  P GKGYAF GP   D KY G+G GIAVRKG+ E + ++NAAI  IRA
Sbjct: 181 ADTIPLND-FLQMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTELVGQLNAAIDGIRA 239

Query: 240 NGKYKEIEKKYFNFDIYG 257
           +G+Y++I ++YF  DIYG
Sbjct: 240 SGEYQKISQQYFKSDIYG 257