Pairwise Alignments

Query, 261 a.a., ABC transporter for L-Arginine, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

 Score =  196 bits (498), Expect = 4e-55
 Identities = 111/253 (43%), Positives = 156/253 (61%), Gaps = 8/253 (3%)

Query: 3   KLVLLGALALSVLSMQAFAEGKPLKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCEEMK 62
           K  LL A A  V+S  A A  K L++GIEAAYPPF +K   G++VGFD DIG+ALC +MK
Sbjct: 5   KKFLLAAAATLVMSANAMAAEK-LRMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMK 63

Query: 63  VKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTNRYYLTPARLVLKEGTAV 122
           V+C+ V  ++DG+IPAL  +K D ++SS+SITD+RK++VDFTN YY    + +  +    
Sbjct: 64  VECSVVTSDWDGIIPALNAKKFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPKNVDF 123

Query: 123 SDSLDELKGKKIGVQRGSIHDRFAKEVLAPKGATIVPYSSQNEIYLDVEAGRLDGTVADA 182
               + LKGK IG QR ++   + ++        I  Y +Q   YLD+ +GR+DG +AD 
Sbjct: 124 KTDKESLKGKVIGTQRATLAGTYLEDNY--PDVEIKLYDTQENAYLDLVSGRIDGILAD- 180

Query: 183 TLLQEGFLDTPAGKGYAFTGPAFTDAKYFGDGIGIAVRKGDKENLDRINAAIAAIRANGK 242
             +Q  +L +  G  + F G    D+    D IGIAVRKGD +  D +N A+A I+A+G 
Sbjct: 181 KYVQYEWLKSKDGSNFEFKGEPVMDS----DKIGIAVRKGDTKLRDDLNKALAEIKADGT 236

Query: 243 YKEIEKKYFNFDI 255
           YK+I  KYF F I
Sbjct: 237 YKKINDKYFPFSI 249