Pairwise Alignments

Query, 261 a.a., ABC transporter for L-Arginine, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas sp. SVBP6

 Score =  298 bits (764), Expect = 6e-86
 Identities = 150/258 (58%), Positives = 188/258 (72%), Gaps = 2/258 (0%)

Query: 1   MKKLVLLGALALSVL-SMQAFAEGKPLKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCE 59
           M K  L+  LA+S+L S   +A G  L+IGIEAAYPPFASK   G IVGFDYDIGNALC 
Sbjct: 1   MNKFTLISGLAMSLLASSSLYAAGDTLRIGIEAAYPPFASKNDKGQIVGFDYDIGNALCA 60

Query: 60  EMKVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTNRYYLTPARLVLKEG 119
           +M+VKC W E EFDGLIP+LKV+KIDA LSSM+I+++RKKSVDFT++YY T +RLV+K+G
Sbjct: 61  QMQVKCEWKEVEFDGLIPSLKVKKIDAALSSMTISEERKKSVDFTHKYYFTSSRLVMKKG 120

Query: 120 TAVSDSLDELKGKKIGVQRGSIHDRFAKEVLAPKGATIVPYSSQNEIYLDVEAGRLDGTV 179
             V D  + LKGK +GVQR +  DR+A EV  PKG  +  Y +  EIY+D+ +GR+D   
Sbjct: 121 AVVDDQYESLKGKTVGVQRATTTDRYATEVFEPKGIKVQRYGNNEEIYMDLASGRVDAIF 180

Query: 180 ADATLLQEGFLDTPAGKGYAFTGPAFTDAKYFGDGIGIAVRKGDKENLDRINAAIAAIRA 239
           AD T+  E FL  P G  YAFTGP   D KY G+G GIAVRKG+ E + ++N AI AIRA
Sbjct: 181 AD-TIPLEDFLSMPRGADYAFTGPELKDPKYVGEGAGIAVRKGNGELVSQLNQAIDAIRA 239

Query: 240 NGKYKEIEKKYFNFDIYG 257
           NG+Y++I+ KYF  DIYG
Sbjct: 240 NGEYQKIQAKYFKSDIYG 257