Pairwise Alignments

Query, 326 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 367 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  224 bits (572), Expect = 2e-63
 Identities = 125/321 (38%), Positives = 189/321 (58%), Gaps = 4/321 (1%)

Query: 6   IGFLIWPSTKALTLALAEEALRVAQRVHPDVVYELSFLQAEPSTEGA---WQLPGEPWGG 62
           IGFL+  +   ++LA A E LR+A ++    +Y  + L  + +   A    Q+  +    
Sbjct: 18  IGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWTTLSVDGNQVWASDGLQITPDASMH 77

Query: 63  KLEGFQKLFLLADEP-PAVIASPLSTALKQLVRAGCVIGGLSAGVYPLAQLGLLDGYRAA 121
           K      + +         +     + L+   R    +G +  G + LA  GLLDG+  +
Sbjct: 78  KAPALDTVIVCGGVGIQRTVTREHVSWLQSQARQSRRLGAVCTGSWALACAGLLDGFDCS 137

Query: 122 VHWRWQDDFAERFPKVIATSHLFDWDRDRLTACGGMSVLDLLLAVLARDHGAELAGAVSE 181
           VHW       E FP+V  ++ LF  DR+R T+ GG + LD++L +++RDHG EL+ A+SE
Sbjct: 138 VHWECLASMQEAFPRVAMSTRLFTLDRNRFTSSGGTAPLDMMLHLISRDHGRELSAAISE 197

Query: 182 ELVVERIREGGERQRIPLQNRLGSSHPKLTQAVLLMEANIEEPLTTDEIAQHVCVSRRQL 241
             V ERIR   + QR+PL++ LG++ PKL + V LMEAN+EEP+  DE+A +V VSRRQL
Sbjct: 198 MFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVAVSRRQL 257

Query: 242 ERIFKQYLNRVPSQYYLELRLNKARQMLMQTSKSIIQIGLSCGFSSGPHFSSAYRNFFGA 301
           ER+F++YL+  PS+YYL+LRL +ARQ+L QT  SII++   CGF S PHFS  YR +FG 
Sbjct: 258 ERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVSTPHFSKCYREYFGI 317

Query: 302 TPREDRNQRRSSSPFELSSVP 322
            PR++R    ++    +  +P
Sbjct: 318 PPRDERVGSNTTQQVAMMPIP 338