Pairwise Alignments

Query, 326 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 319 a.a., HTH-type transcriptional regulator CdhR from Pseudomonas putida KT2440

 Score =  211 bits (537), Expect = 2e-59
 Identities = 123/305 (40%), Positives = 183/305 (60%), Gaps = 3/305 (0%)

Query: 6   IGFLIWPSTKALTLALAEEALRVAQRVHPDVV-YELSFLQAEPS-TEGAWQLPGEPWGGK 63
           I FL+ P   A+    A E LRVA R    +  +++  L  E         +  +   G+
Sbjct: 9   IAFLLVPGFSAMGFISAVEPLRVANRFGGQLYRWQVLSLDGEAVLASNGMSINADAALGE 68

Query: 64  LEGFQKLFLLAD-EPPAVIASPLSTALKQLVRAGCVIGGLSAGVYPLAQLGLLDGYRAAV 122
            E    L ++A  EP A +A  L  AL++L     ++GG+  G   LA+ GLL+GYRA +
Sbjct: 69  GEPANILLVVAGFEPLANVAPKLLHALRRLNHEAVMLGGIDTGAMVLAEAGLLEGYRATL 128

Query: 123 HWRWQDDFAERFPKVIATSHLFDWDRDRLTACGGMSVLDLLLAVLARDHGAELAGAVSEE 182
           HW   + F ER+P + AT  LF+ DR R+T  GG + +DL+L ++A+ HG+ELA  VSE+
Sbjct: 129 HWEALEAFKERYPGLQATQELFEIDRSRITCAGGTASIDLMLHLIAQSHGSELAVKVSEQ 188

Query: 183 LVVERIREGGERQRIPLQNRLGSSHPKLTQAVLLMEANIEEPLTTDEIAQHVCVSRRQLE 242
            V+ RIR+  + QR+ +  R G S+ KL  A+  ME +IE PL+T E+A  + V+RRQLE
Sbjct: 189 FVLGRIRQRQDHQRMQIGARYGISNKKLVHAIGEMEKHIEPPLSTLELAAAIKVTRRQLE 248

Query: 243 RIFKQYLNRVPSQYYLELRLNKARQMLMQTSKSIIQIGLSCGFSSGPHFSSAYRNFFGAT 302
           R+F+ +L+  PS +YL LRL+KARQ+L QT  S+ ++ L+CGF    +F+  Y+  FG  
Sbjct: 249 RLFRMHLDATPSGFYLGLRLDKARQLLAQTDMSVTEVSLACGFELPSYFTRRYKLRFGRC 308

Query: 303 PREDR 307
           PRE+R
Sbjct: 309 PREER 313