Pairwise Alignments
Query, 1972 a.a., hypothetical protein from Pseudomonas simiae WCS417
Subject, 1395 a.a., Leucine-rich repeat domain protein from Pseudomonas putida KT2440
Score = 214 bits (546), Expect = 5e-59
Identities = 189/641 (29%), Positives = 298/641 (46%), Gaps = 59/641 (9%)
Query: 47 IPQWYKTASPDAHDTLKNRVSRAWEAQSKVDQAMGTLKSPQAFGAPLLAQLLKRRFGIER 106
+P W K AS L+ R AQ +VD +G + F LL + + R +
Sbjct: 19 LPGWLKRASAQELTELRAAALRQQRAQDQVDAWLGAITPLDEFAESLLKRAPEARSIKQV 78
Query: 107 DVETTYLRLYIPLTIPWFSVRSGAARTWTVS---LLDAALHNFEAGEV----FEASSGFI 159
D+ LRL P S + T VS LL AALHNF E+ F A S +
Sbjct: 79 DLRQAQLRLVTLQPKPSISPALPSTSTRIVSTQTLLSAALHNFHEKEMQPGWFAAGSQLV 138
Query: 160 TKPTSTGQFDTLPALDTRITVAQFTALCRELDIGAKYQRYLEQFFDFNNPLAMASLQLKL 219
T ++G LP ++ F LCR++DIG +YQ +L+ + ++L+ L
Sbjct: 139 T---ASGHL--LP-----LSAQAFVRLCRDIDIGRRYQSHLQSKLEGEGGAVESTLEEAL 188
Query: 220 KHSQAADLNVALKMAWMKGDLHDDQSVTRLQRLLNTDDN-PSTCYPLQCYNLSIMSTALT 278
+ A+L +A A +K ++ D+Q+ + + + T P+ L+C+ L ++ +
Sbjct: 189 R----ANLALAAIAARIKDEI-DEQTCQWINQAVGTASFLPADNAVLKCHTLRLLGKEVI 243
Query: 279 GIVLFAENIGSRHPVGVIAYIPDDPYAPLKQYPTLVDFMTALGNNLRSAEYQQFFSRFIS 338
G ++ +R +GVIA+ P+DPYAP+ + + LG LR+ Y+++F RF++
Sbjct: 244 GALVIEVRQNARL-LGVIAWFPEDPYAPVSWHTSWELLYMTLGIRLRNEAYRRYFQRFVA 302
Query: 339 HEERGLFFADLNRRLSKVTWHPHTRGDPLPSWRETPIDQPHLAFRATAISGDLFTHLFQT 398
+R F A LN LS H +T P++ L R AI GD+F L Q
Sbjct: 303 ERDRIAFCAALNALLS----HGNT---------VLPLE---LDGRCFAIEGDVFVALRQA 346
Query: 399 KLSKVFSDARAIAVSTASVDQRVRWERWAIVQKVASAILQIAALIVAPFVPPVGLLMLGY 458
++ K+ DAR +AVST D +R A +Q L +A L A FVP +G +LG
Sbjct: 347 RIEKMLDDARVLAVSTEDEDVA---DRRARLQGYLDLGLSVAGL-AALFVPVLGQALLGL 402
Query: 459 SAYQMLDEAFEWVIDWAVGDVTEAFAHLLSFVEQGIQLGLFIAGAPIAASALRTLLPADA 518
+ Q+ E +E DW +GD A HL + + + + AG A+AL L A
Sbjct: 403 TVVQLAGEVYEGYQDWQLGDRDAALGHLFNVADTVVMAAVTAAG----ATALGKL--AQR 456
Query: 519 IKFFDSFKPVALPDGKTRLWNPDLAPYAHD-LRLASHSYPNAQGLHAYNGKNILLLADKP 577
+ D+ PV+L DG+ RL +P L+ Y + + L N G+++ L D
Sbjct: 457 VARVDAMVPVSLGDGQLRLCDPSLSGYQREGVDLMVGQAVNE------TGRSLRRLHDAV 510
Query: 578 FMVETDPITQQRYLQHPTRSNAYRPPLLSNDKGAWLNELDTPLSW-DSTTLMKRQGPRTA 636
+ V R + HP+R AY P L N G W++E + P W D +++R RTA
Sbjct: 511 YEVSEGDDGAWR-IHHPSRPGAYSPALEHNGAGGWVHEFEQPQRWHDPAYMVRRLASRTA 569
Query: 637 GLSDEQLVAARRISGTREGALRKMYVNQHQPPPLLTDTVDR 677
+ DE + A + +G LR++ + P L D ++R
Sbjct: 570 QVPDEAVSVALQTTGFEADCLRRLLLENAPAPARLLDAIER 610
Score = 135 bits (339), Expect = 5e-35
Identities = 153/549 (27%), Positives = 246/549 (44%), Gaps = 74/549 (13%)
Query: 793 RKQLAGRAQSHRAELFDTRYQQLERPITPR--QRAMIDNTPGLPLTAADALLDTANSQEL 850
R+QL R + F+ + ER I+P+ R ++ + PGL A +++ A+S E+
Sbjct: 610 RQQLHRDFPMLRGDAFEEVFN--ERQISPQAADRVLMRDFPGLSHRCAREIVEGASSIEM 667
Query: 851 KAVD-EGKIPVRLSELAQSLRDEARVNHAYDGLYLDSTETLDTHRLALHSLEKLPGWAGK 909
+++ G++P+ L+E A+ ++R++ A GL + E DT +LAL ++ + W+
Sbjct: 668 ESLTGAGRVPLALAERARWAIRDSRIDRACAGLRQAAAENDDTGKLALGLIDAIAPWSAG 727
Query: 910 KLRIEIRSSTPEAALLDAIGKPKARIKRTLVRSPDGRYTPQDDSGELSGATDLYNAVLQA 969
+ P A + + +TL R D R +L G + + +
Sbjct: 728 -----VNVELPAAG--------RGGLLQTLRRQLDSRQR------QLLGISQMTD----- 763
Query: 970 LPDAERNALGLHIGQGPALRLALRTHALKRAPLRTLITAEPTRAPTDTRTHLRLL-GLDN 1028
+ALG +G+ LA R A + L R R +RL G
Sbjct: 764 ------DALGERLGREA---LADREAAARMIGL--------ARVGQGIRPPVRLFDGRLG 806
Query: 1029 YPAAPAEQHDLQALAREL---YPAHTDEQIGEMIQTLERRPGGAFATLTALRQEFQHLNR 1085
YP + QAL R L YP + EQ+ +Q L R + ++ L Q L +
Sbjct: 807 YPLSGHLTGTRQALRRTLNHVYPVMSSEQLEAYLQDLAWRGVDPWNHVSQLLQAKVSLKQ 866
Query: 1086 ALADWAARPPHSYPGTEVSMGRQEYSDMRQNRVLFWRELLSAWRRETETDAYFEHPSQNG 1145
AL W G +R+ +V R + ++W+R T + ++
Sbjct: 867 ALQAWRN-----------DAGLNIVRRLRRFKVA--RRITASWQRFTPGEVAGDYHL--- 910
Query: 1146 QTLKSHAILYGELPALPAN--FEHISFLELSGNQTALTNIDV-FLRSFPNIRHLSITHAQ 1202
TL + GELP LP N F+HI+ L L Q +T++D FL F +R+L + + Q
Sbjct: 911 -TLVGERV--GELPTLPDNVSFDHITHLTLRDMQ--VTSLDAGFLGRFSKVRNLDLRNNQ 965
Query: 1203 LGQLPATLSAMPRLNTLILSNCAITLTPDSLNTLTAMNRLRTLDLYSNPLGLSPSVERMI 1262
L +LPA + + L TL L I L+ + L+ + LR L+L NP+GL P +
Sbjct: 966 LTRLPAGIEQLTELRTLRLGGNQIVLSSEDNLRLSQLVELRRLELNGNPVGLLPPLASFP 1025
Query: 1263 DLRALDLSETGISNLPAGLLSRASLELAVLSRNRITQLPSALFELPADTSATFDLSGNPL 1322
LR L L TG+ LPA L +LEL + N+I LP AL +P +L NPL
Sbjct: 1026 LLRRLSLRNTGLGELPADLARHGNLELLDMRDNQIQTLPEALSLVPLRLWRGLELHDNPL 1085
Query: 1323 SRATLEQVK 1331
S TL++++
Sbjct: 1086 SDETLQRLQ 1094
Score = 79.0 bits (193), Expect = 4e-18
Identities = 72/235 (30%), Positives = 105/235 (44%), Gaps = 18/235 (7%)
Query: 1726 RAFKTL--LEAAWRRESELDDNNDDVRPTHKLTFEMPILGELPEL--SARFDHVTTLDLE 1781
R FK + A+W+R + +V + LT +GELP L + FDH+T L L
Sbjct: 884 RRFKVARRITASWQRFTP-----GEVAGDYHLTLVGERVGELPTLPDNVSFDHITHLTLR 938
Query: 1782 GNGTTTRIDGLLKCFPKLRSLVITRFSLGEIPLTALSLPALNALSLTESAIRLTPTSVHA 1841
T+ G L F K+R+L + L +P L L L L + I L+
Sbjct: 939 DMQVTSLDAGFLGRFSKVRNLDLRNNQLTRLPAGIEQLTELRTLRLGGNQIVLSSEDNLR 998
Query: 1842 LSWMSGLEYLDLGGNRLGLTPDVSQLTELETLYLPDTDITHLPQGLFALHELRSLDLSDN 1901
LS + L L+L GN +GL P ++ L L L +T + LP L L LD+ DN
Sbjct: 999 LSQLVELRRLELNGNPVGLLPPLASFPLLRRLSLRNTGLGELPADLARHGNLELLDMRDN 1058
Query: 1902 LIEEIPADFLQLATQLDTDSDISGNPLSASSLDTLRHYYLLTGDDLAVAAAGLDE 1956
I+ +P + +L ++ NPLS +L L+ LA A+AG E
Sbjct: 1059 QIQTLPEALSLVPLRLWRGLELHDNPLSDETLQRLQ---------LARASAGAAE 1104
Score = 70.1 bits (170), Expect = 2e-15
Identities = 70/293 (23%), Positives = 125/293 (42%), Gaps = 12/293 (4%)
Query: 1353 VNTLFPDFSVNEVNRFLFGLPGTIEIGQIELARLEVEYADLSDGLDTWARQAPAP-EEQA 1411
+N ++P S ++ +L L +++L L L W A +
Sbjct: 824 LNHVYPVMSSEQLEAYLQDLAWRGVDPWNHVSQLLQAKVSLKQALQAWRNDAGLNIVRRL 883
Query: 1412 RRVEFKEELQACWRREGALDTSGPQAISTFTVESPQPVTGTFPSLDSGV-FRHVSSLHLK 1470
RR + + A W+R + +G ++ G P+L V F H++ L L+
Sbjct: 884 RRFKVARRITASWQRFTPGEVAGDYHLTLVGER-----VGELPTLPDNVSFDHITHLTLR 938
Query: 1471 GAQGPFPLQSPLFFRGFPTLNHLFIEGYVMGDIPASVWDLPQLSSLRLPRCALTLSTEST 1530
Q F F + +L + + +PA + L +L +LRL + LS+E
Sbjct: 939 DMQ--VTSLDAGFLGRFSKVRNLDLRNNQLTRLPAGIEQLTELRTLRLGGNQIVLSSEDN 996
Query: 1531 ASLTTLSELATLDLSHNTALGQLPDFSALPRLTSIELEDTGLTAIPDGLLKAVERQRVNL 1590
L+ L EL L+L+ N +G LP ++ P L + L +TGL +P L + + +++
Sbjct: 997 LRLSQLVELRRLELNGNP-VGLLPPLASFPLLRRLSLRNTGLGELPADLARHGNLELLDM 1055
Query: 1591 SNNLITQIPDSAFRLPDSVTAVFDLSRNPLNRSGL--MQIKRHCQRTGEHWRV 1641
+N I +P++ +P + +L NPL+ L +Q+ R E RV
Sbjct: 1056 RDNQIQTLPEALSLVPLRLWRGLELHDNPLSDETLQRLQLARASAGAAERRRV 1108