Pairwise Alignments

Query, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  441 bits (1135), Expect = e-128
 Identities = 255/541 (47%), Positives = 354/541 (65%)

Query: 1   MSLRNMNIAPRAFLGFAFIGALMLFLGVFALNQMSKIRGATEDITMSSVPSIRALDEFTQ 60
           MSLRNM I  RA L F  + +L++ +G+F L QM+K+R +   I  S +PSI  + +   
Sbjct: 1   MSLRNMRIGLRASLSFGVLASLLVIVGMFGLGQMAKLRQSALVIEASWMPSIENIHDSAA 60

Query: 61  LTLRLRVLSYRLLTNREPEVQQKTLEAFEVRNQQIRTAQGIYEKLIESSEERAAYDDYVR 120
           +   +R+ + RL T  E  ++  +      ++ +++T    ++ L+   EER        
Sbjct: 61  IVASIRLEALRLATTDESRIRDNSKALITRQHTELQTLLDHHKTLLSGDEEREMLTQLEG 120

Query: 121 LLGQYHQIEERMKSLSRANQVEELRSLLNNELLSNSEQVNAVLTRLLDINNKMALATNKD 180
               Y  +  ++ +L   +Q ++   LLN+ L      +N  LT ++  N          
Sbjct: 121 NANAYLSLVGQIVALVDKDQQQDAIDLLNSRLAPQGVILNKSLTDMITFNQSGVQTAVDS 180

Query: 181 AEDQYNMAFNMVVSLLVIATLLTLLFAWLLTRSITLPIAQALEAAEEVAEGNLTRPIKVD 240
           A   Y+ A  +V S++V+A   TLL AWLLTRSIT P+ QAL  A  +A G+L++PI V 
Sbjct: 181 AAQTYSSAQWIVGSIIVLALTATLLLAWLLTRSITAPLGQALIVARTIASGDLSQPIAVS 240

Query: 241 GSDEAGRLLAAMAKMQDKLRDTLQRIAGSATQLASAAEELNAVTDESARGLTQQNNEIEQ 300
           G DE  +LL A+A MQ +L+ TL+ I+ SA QL  AAEE+++V ++S R L  QN+EIEQ
Sbjct: 241 GKDEPAQLLTALATMQAQLQGTLRGISESAQQLGCAAEEMSSVMEQSTRDLQAQNDEIEQ 300

Query: 301 AATAVNEMTSAVEEVARNAVSTSEASRNATTSAGDGRDLVQETVSAIERMSGDVQATATL 360
           AATAV EM++AV+EVA NAVS++EAS+ +   +  G   + ET+S+I+ +  +V   +  
Sbjct: 301 AATAVTEMSAAVDEVAGNAVSSAEASQASDEDSKHGHYQISETISSIQNLVDEVLGASNK 360

Query: 361 IGDLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420
              LA +++DI KVL+VIRG+A QTNLLALNAAIEAARAGEAGRGFAVVADEVR+LA RT
Sbjct: 361 AEGLAVQAQDISKVLEVIRGIAAQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRT 420

Query: 421 QQSTSEIERMIGSIQAGTEHAVDSMRNSTERAESTLNIAKGAGMSLDTINTAIVEINERN 480
           Q ST EIE+MI  IQ GT+  V+++ +S E+A  TL  A  AG +L+ I  AI +I++RN
Sbjct: 421 QDSTEEIEQMITGIQQGTQGTVEALNSSAEQAGHTLQRANSAGSALEKITAAISQISQRN 480

Query: 481 LVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGASQTSAASSELSRLAVDLNGMVGRFR 540
           LVIASAAE+QA VAR+VDR+LVNIRDLS Q+A GA+QTSAAS ELSRLAVDLNG+V RF 
Sbjct: 481 LVIASAAEQQALVARDVDRSLVNIRDLSTQTAAGATQTSAASQELSRLAVDLNGLVARFV 540

Query: 541 L 541
           L
Sbjct: 541 L 541