Pairwise Alignments

Query, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  323 bits (829), Expect = 9e-93
 Identities = 199/482 (41%), Positives = 287/482 (59%), Gaps = 28/482 (5%)

Query: 64  RLRVLSYRLLTNREPEVQQKTLEAFEVRNQQIRTAQGIYEKLIESSEERAAYDDYVRLLG 123
           R +V  Y    N +   QQ  L+A +   Q +   + +  K+   +E  A+ DD    +G
Sbjct: 181 RFQVRGYTYSGNAD--YQQTALKAID---QALAELRALPAKV--PAEHAASLDDAATAMG 233

Query: 124 QYHQIEERMKSLSRANQVEELRSLLNNELLSNSEQVNAVLTRLLDINNKMALATNKDAED 183
            Y     +  +   A++    R +    +L  + Q              M  A+  +  D
Sbjct: 234 GYRDAVTQFGNAQLASEQALQRMVEQGTVLLQASQ--------------MMTASQTEVRD 279

Query: 184 QYNMAFNMVVSLLVIATLLTL----LFAWLLTRSITLPIAQALEAAEEVAEGNLTRPIKV 239
               A     +LL +AT+L L    L AW +TR I +P+ Q L AAE VA G+LT+ ++V
Sbjct: 280 A---AAAQAKTLLTVATVLALALGLLAAWAITRQIIIPLRQTLRAAERVASGDLTQSLQV 336

Query: 240 DGSDEAGRLLAAMAKMQDKLRDTLQRIAGSATQLASAAEELNAVTDESARGLTQQNNEIE 299
              DE G+L A+M +M   LR+ +  I    TQ+ASAAEEL+AVT++++ G+  Q  E +
Sbjct: 337 QRRDELGQLQASMHRMTQGLRELIGGIGDGVTQIASAAEELSAVTEQTSAGVNNQKVETD 396

Query: 300 QAATAVNEMTSAVEEVARNAVSTSEASRNATTSAGDGRDLVQETVSAIERMSGDVQATAT 359
           Q ATA+N+MT+ V EVARNA   SEA+  A   A +G  +V E V+ IER++ +V  ++ 
Sbjct: 397 QVATAMNQMTATVHEVARNAEQASEAALMADQQAREGDRVVGEAVAQIERLASEVVNSSE 456

Query: 360 LIGDLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHR 419
            +  L  ES  IG VLDVI+ +A QTNLLALNAAIEAARAGEAGRGFAVVADEVR+LA R
Sbjct: 457 AMNLLKTESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQR 516

Query: 420 TQQSTSEIERMIGSIQAGTEHAVDSMRNSTERAESTLNIAKGAGMSLDTINTAIVEINER 479
           TQQST EIE +I  +Q+GT+     M NS +  +S++ + + AG SL+TI   +  I   
Sbjct: 517 TQQSTEEIEELIAGLQSGTQRVASVMDNSRQLTDSSVELTRRAGSSLETITRTVSSIQAM 576

Query: 480 NLVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGASQTSAASSELSRLAVDLNGMVGRF 539
           N  IA+AAEEQ  VA E++R+++N+RD+S Q++  + +T+++S EL+RL   L G+VGRF
Sbjct: 577 NQQIATAAEEQTAVAEEINRSVMNVRDISDQTSAASEETASSSVELARLGTHLQGLVGRF 636

Query: 540 RL 541
           RL
Sbjct: 637 RL 638