Pairwise Alignments

Query, 448 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 461 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 94.7 bits (234), Expect = 5e-24
 Identities = 109/464 (23%), Positives = 205/464 (44%), Gaps = 38/464 (8%)

Query: 3   RSLRVRLMLAAATLAVLFMLGLLPAMQGAFSLALQ-DSIEQRLASDVTTLISAARVENNR 61
           RSL  R+ L+      L  L ++  +  +F L +  DS   R+  ++ T ++  + E+  
Sbjct: 7   RSLVRRVALSLLLAFTLAWLAVVVYLYVSFRLTMHTDSGVVRVGRELNTTLAEIQREDVA 66

Query: 62  LLMPAQLPDE--RFNLTDSRLLGYIY----DREGHLVWRSRATKEENINYKPRYDGRGNE 115
             +   L  +     + ++ L G +     +REG L++ S       +  +P        
Sbjct: 67  AAVIDALARQINAMRVAEADLPGDVVFMLRNREGKLLYESPGIAGRTLRGEPD------- 119

Query: 116 FARIREA--NGQEFFVYDVEVRLLGGKSAAFSIVALQPVREYQLTLEGLRENLYLGFGAA 173
             R+ +A    Q +++Y+       G+S  +++   +P       L  +  ++++ F  A
Sbjct: 120 --RMVDAVVENQRYWLYE-------GRSERWTVWVAEPNGGLSWVLMFIGSSIFMPFLIA 170

Query: 174 LLVLLTLLWLGLTWGLQALRRLSQELDQIEGGTRESLS-EQHPRELLRLTGSLNRLLHSE 232
              +L  +W+    GL+ LR L + +D         L  E    EL+ L  ++  LL   
Sbjct: 171 FPFVLAPVWIAAAQGLKPLRVLGERIDTRSAEDLSPLGFEPRHAELVPLVKAIEGLLAQL 230

Query: 233 REQRARYRDSLDDLAHSLKTPLAVLQGVSEDMAQRPEDRDQ---AWVLQSQIERMSQQIS 289
           R +  R R  ++D AH L+TPLAV+   +  +A+  + R++   A  L   I R S  I 
Sbjct: 231 RGKVERERSFVNDAAHELRTPLAVIGAQAHVLARSSDPREREEAARHLTHAIARGSHLIQ 290

Query: 290 YQLQRASLRKSGLVRHQVRLEPVLQSLCDTLDKVYRD---KRVTVSFELPEECDVPIEKG 346
             L+ A++   G  R  V+   V + +   L +  +D   +R+ +  E P+     +   
Sbjct: 291 QLLELATM--DGGERPAVQRIDVAELMRHHLAQASKDADARRLELVLESPDSLAFDLPVP 348

Query: 347 ALLELLGNLLENA--YRLCLSEVRISFAENLEGSELCIEDDGPGVPPDQRARILQRGER- 403
               +L NLL+NA  Y     ++ ++  ++ +G  L + D+GPG+P ++ A + +R  R 
Sbjct: 349 LFESVLRNLLDNALKYVDAGGQIVVTLRQSADGLLLSVVDNGPGIPREEHALVFERFHRG 408

Query: 404 LDRQHPGQGIGLAVVKDIIESYGARLTLGDSPLG-GAAFKIHFP 446
                 G G+GLA+ +   +  G  + L   P G G AF +  P
Sbjct: 409 AGTSTQGTGLGLAIARQACQRMGGTVELAHGPGGRGCAFTVLVP 452