Pairwise Alignments

Query, 448 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 486 a.a., two-component system sensor histidine kinase PhoQ from Escherichia coli ECRC62

 Score =  218 bits (554), Expect = 4e-61
 Identities = 158/479 (32%), Positives = 239/479 (49%), Gaps = 51/479 (10%)

Query: 4   SLRVRLMLAAATLAVLFMLGLLPAMQGAFSLALQDSIEQRLASDVTTLISAARVENNRLL 63
           SLRVR +LA A + ++  L         +S++   +  + L  +     + A+ ENN+L 
Sbjct: 12  SLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFRLLRGESNLFYTLAKWENNKLH 71

Query: 64  MPAQLPDERFNLTDSRLLGYIYDREGHLVWRSRATKEENINYKPRYDGRGNEFARIREAN 123
           +  +LP+     + +  L  IYD  G L+W  R         +P +  + N F  I    
Sbjct: 72  V--ELPENIDKQSPTMTL--IYDENGQLLWAQRDVPWLMKMIQPDWL-KSNGFHEI---- 122

Query: 124 GQEFFVYDVEVRLLGGKSAAFSIVALQPVREYQLTLE---GLRENLYLG----------- 169
             E  V D  + L G  S       LQ VRE     E    +  N+Y             
Sbjct: 123 --EADVNDTSLLLSGDHSIQQQ---LQEVREDDDDAEMTHSVAVNVYPATSRMPKLTIVV 177

Query: 170 ---------------------FGAALLVLLTLLWLGLTWGLQALRRLSQELDQIEGGTRE 208
                                  A LL+++ LLW+   W L+ +  L++E+ ++E   RE
Sbjct: 178 VDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRE 237

Query: 209 SLSEQHPRELLRLTGSLNRLLHSEREQRARYRDSLDDLAHSLKTPLAVLQGVSEDM-AQR 267
            L+    REL  L  +LNRLL SERE+  +YR +L DL HSLKTPLAVLQ     + +++
Sbjct: 238 LLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEK 297

Query: 268 PEDRDQAWVLQSQIERMSQQISYQLQRASLRKSGLVRHQVR-LEPVLQSLCDTLDKVYRD 326
               D   V+  QI R+SQQI Y L RAS+R   L+  ++  + P+L +L   L+KVY+ 
Sbjct: 298 MSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSALNKVYQR 357

Query: 327 KRVTVSFELPEECDVPIEKGALLELLGNLLENAYRLCLSEVRISFAENLEGSELCIEDDG 386
           K V +S ++  E     E+   +E++GN+L+NA + CL  V IS  +  E   + +EDDG
Sbjct: 358 KGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEISARQTDEHLYIVVEDDG 417

Query: 387 PGVPPDQRARILQRGERLDRQHPGQGIGLAVVKDIIESYGARLTLGDSPLGGAAFKIHF 445
           PG+P  +R  I  RG+R+D   PGQG+GLAV ++I E Y  ++  G+S LGGA  ++ F
Sbjct: 418 PGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIF 476