Pairwise Alignments

Query, 332 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 352 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  141 bits (356), Expect = 2e-38
 Identities = 103/334 (30%), Positives = 163/334 (48%), Gaps = 6/334 (1%)

Query: 1   MRERTIASHYARAALGGARRAGYDYSGLLQQVGITPELLTEPRARIAPEQFTRLLQMLWL 60
           M ERT ++ +A   +      G D   L +Q+G+    L++P AR   +  TRL Q    
Sbjct: 1   MSERTTSASWAMGIVKALEMDGLDCRALFKQLGLDYAALSDPDARFPQDSMTRLWQRAVE 60

Query: 61  ALDDEYLGFADGPSKR-GTFAMMCHALIHCRTLEKALERGLLFYSLFPQGP--RWQLTRE 117
              +  +G   G   R  +F +  +AL+   TL +   R + +  +  +     ++L  E
Sbjct: 61  LSGNPAIGLNMGKVVRPASFHVAGYALMSSNTLAEGFMRLVRYQRIIAESADLSFRLVPE 120

Query: 118 GEMARLSLDDSQLWDPEHFLSECLLVIWHRLGSWLIGQRIRLHQATFSYPQPAHASEYDL 177
           G    L++    L  P    +E  L     L  WL G+ ++  +      QPA  + Y  
Sbjct: 121 GYALILTVHGDHL-PPTRQSAEASLASALALCGWLTGRTLQPRKVVLQGEQPADLAPYKQ 179

Query: 178 LFPCAQVFGAPNSSLVFPARYLNLPLLQDERTLKHFLERSPADLLSRPDEGDSLSSQLRR 237
            F     F AP  +L+F    ++ PL      +    +R   + L+R  E   ++ + R+
Sbjct: 180 AFHAPLEFNAPYDALIFERADMDAPLPTANEAMALLHDRFAGEYLARFSES-RVTHKARQ 238

Query: 238 LLSRDRSPW-PDLEAVAQHLHISPQTLRRHLREEGTSFQALKDELRRDIAIYHLGRADLS 296
           +L R      P  E VAQ LH+S +TL+R L+EEGTSFQ L D+ RR++A  +L +  ++
Sbjct: 239 VLCRLLPQGEPKREVVAQALHLSQRTLQRRLQEEGTSFQTLLDDTRRELAEQYLAQPSMT 298

Query: 297 LQEIAEQLGFSEPSAFHRAFKKWTGLTPGAYRAQ 330
           L EIA  LGF++PS F RAF++W   TPG YRA+
Sbjct: 299 LLEIAYLLGFADPSNFFRAFRRWFDATPGEYRAR 332