Pairwise Alignments

Query, 332 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 326 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  140 bits (352), Expect = 6e-38
 Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 6/307 (1%)

Query: 28  LLQQVGITPELLTEPRARIAPEQFTRLLQMLWLALDDEYLGFADGPSKR-GTFAMMCHAL 86
           + +Q+G+    L +P AR   +  TRL Q+      +E +G       R  +F ++ +AL
Sbjct: 1   MFKQLGLDFAALDDPDARFPQDSMTRLWQLAVELSGNEAIGLNMARVVRPASFHVVGYAL 60

Query: 87  IHCRTLEKALERGLLFYSLFPQGP--RWQLTREGEMARLSLDDSQLWDPEHFLSECLLVI 144
           +  RTL +  ER + +  +  +     + L  EG    L++    L  P    +E  L  
Sbjct: 61  MSSRTLAEGFERLVRYQRIIAESSDLSFVLGPEGYSLILTVHGDHL-PPTRHSAEASLAC 119

Query: 145 WHRLGSWLIGQRIRLHQATFSYPQPAHASEYDLLFPCAQVFGAPNSSLVFPARYLNLPLL 204
              L  WL G+ ++  +     PQP +   Y + F    VFGAP+ +LVF    +  PL 
Sbjct: 120 ALALCKWLSGRPVQPRRVLVQGPQPKNVEPYKVAFHSPLVFGAPHDALVFERADMEAPLP 179

Query: 205 QDERTLKHFLERSPADLLSRPDEGDSLSSQLRRLLSRDRSPW-PDLEAVAQHLHISPQTL 263
                +    +R   + L+R  E   +S ++R++L R      P  E +AQ LH+S +TL
Sbjct: 180 TANEAMAVLHDRFAGEYLARFSES-RVSHRVRQVLCRILPQGEPKRETLAQALHLSQRTL 238

Query: 264 RRHLREEGTSFQALKDELRRDIAIYHLGRADLSLQEIAEQLGFSEPSAFHRAFKKWTGLT 323
           +R L+EEGTSFQ L D+ RR++A  +L +  ++L E A  LGF++PS F+RAF++W   T
Sbjct: 239 QRRLQEEGTSFQTLLDDTRRELAEQYLAQPGMTLLETAYLLGFADPSNFYRAFRRWFDAT 298

Query: 324 PGAYRAQ 330
           P  YRA+
Sbjct: 299 PSEYRAR 305