Pairwise Alignments

Query, 332 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  197 bits (502), Expect = 3e-55
 Identities = 129/334 (38%), Positives = 182/334 (54%), Gaps = 6/334 (1%)

Query: 1   MRER-TIASHYARAALGGARRAGYDYSGLLQQVGITPELLTEPRARIAPEQFTRLLQMLW 59
           MRE  ++A ++  A L   R    +    L  VGI P+LL +P AR+  + F +L   L 
Sbjct: 1   MRESDSVAVYFLNAMLHALRDTPAERDAQLLAVGIAPQLLDQPLARVPAKAFAQLWLALI 60

Query: 60  LALDDEYLGFADGPSKRGTFAMMCHALIHCRTLEKALERGLLFYSLFPQGPRWQLTREGE 119
             LDDE+ G        G+FA++C  LI    LEKAL + +  + LF +  R  LT  G 
Sbjct: 61  QRLDDEFFGLDSHGMPLGSFALICRGLILEPNLEKALRQCMGGFGLFLRDLRGSLTVRGG 120

Query: 120 MARLSLDDSQLWDP--EHFLSECLLVIWHRLGSWLIGQRIRLHQATFSYPQPAHASEYDL 177
            A +S+  S + DP    +  E  LV+   +  WL G+RI + +   +  +PA   +  L
Sbjct: 121 RAVISVQ-SNIADPLTRVYAEETYLVLMIGMLCWLAGRRIAIDRTELAVSRPAQEDDLLL 179

Query: 178 LFPCAQVFGAPNSSLVFPARYLNLPLLQDERTLKHFLERSPADLLSRPDEGDSLSSQLRR 237
             P  ++ G+  + + F + YL LP++QD   LK FL  +P  L+ R    + L +++ R
Sbjct: 180 WGPDLRL-GSGRTEVEFDSAYLRLPVVQDRAALKTFLRSAPQGLVIRFRNQNGLVAEVYR 238

Query: 238 LLSRDR-SPWPDLEAVAQHLHISPQTLRRHLREEGTSFQALKDELRRDIAIYHLGRADLS 296
            L   R   WP L A+AQ   IS  T RR L  EG S+Q +KDE+RR +A   L    LS
Sbjct: 239 HLRALRYGQWPTLAALAQQQGISASTFRRQLEREGRSYQQIKDEVRRAMAFERLREGALS 298

Query: 297 LQEIAEQLGFSEPSAFHRAFKKWTGLTPGAYRAQ 330
           + EIAEQ GF EPSAFHRAFKKWTG +PG+YRA+
Sbjct: 299 IAEIAEQAGFQEPSAFHRAFKKWTGQSPGSYRAR 332