Pairwise Alignments

Query, 332 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 8e-30
 Identities = 100/327 (30%), Positives = 146/327 (44%), Gaps = 22/327 (6%)

Query: 19  RRAGYDYSGLLQQVGITPELLTEPRARIAPEQFTRLLQMLWLALDDEYLGFADGPSKRGT 78
           R  G+D   LL++ G+    L+E  AR++     R + M   A+  E  G A    + G 
Sbjct: 24  RELGHDPEPLLRRYGLDATRLSEAGARLS---IPRYMHMGHAAI--EMSGEAALGLRMGR 78

Query: 79  FAMMCHALIHCRTLEKALERGLLFYSLFPQGPRWQLTREGEMARLSLDDSQLW------- 131
            + + H  +   T  +A   G    +L    P +     G  +R   D    W       
Sbjct: 79  LSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGH-SRFEEDAQGAWLRFYSIS 137

Query: 132 ---DPEHFLSECLLVIWHRLGSWLIGQRIRLHQATFSYPQPAHASEYDLLFPCAQVFGAP 188
              D   F+ + LL  W    + L G  ++  +    +  P++A+ Y  L      F A 
Sbjct: 138 PYNDYNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARYQPLCSTPVQFAAD 197

Query: 189 NSSLVFPARYLNLPLLQD-ERTLKHFLERSPADLLSRP---DEGDSLSSQLRRLLSRDRS 244
            + L      L L        T +H L+   A+LL R      G+ ++  L  LL+  R 
Sbjct: 198 GNQLRLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGERITHLLGPLLNGGRE 257

Query: 245 PWPDLEAVAQHLHISPQTLRRHLREEGTSFQALKDELRRDIAIYHLGRADLSLQEIAEQL 304
           P  DLE VA HL +   TLRR L EEGT F+ L +E RRD+A  ++    L+  EIA  L
Sbjct: 258 P--DLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTALAFGEIAYLL 315

Query: 305 GFSEPSAFHRAFKKWTGLTPGAYRAQE 331
           GF+   AF RAFK+WTGLTPG +R  +
Sbjct: 316 GFASAEAFQRAFKRWTGLTPGEFRRSQ 342