Pairwise Alignments

Query, 1048 a.a., ribonuclease E from Pseudomonas simiae WCS417

Subject, 1091 a.a., ribonuclease E from Pseudomonas putida KT2440

 Score = 1422 bits (3680), Expect = 0.0
 Identities = 831/1129 (73%), Positives = 872/1129 (77%), Gaps = 137/1129 (12%)

Query: 1    MLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKGRITRIEPSLEAAFVDFGSE 60
            MLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKG+ITRIEPSLEAAFVDFGSE
Sbjct: 4    MLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKGKITRIEPSLEAAFVDFGSE 63

Query: 61   RHGFLPLKEISREYFKKAPEGRVNIKDVLSEGQEVIVQVEKEERGNKGAALTTFISLAGR 120
            RHGFLPLKEISREYFKKAPEGRVNIK+VLSEGQEVIVQVEKEERGNKGAALTTFISLAGR
Sbjct: 64   RHGFLPLKEISREYFKKAPEGRVNIKEVLSEGQEVIVQVEKEERGNKGAALTTFISLAGR 123

Query: 121  YLVLMPNNPRAGGISRRIEGEERNELREALNGLIAPADMGLIVRTAGLGRSSEEMQWDLD 180
            YLVLMPNNPRAGGISRRIEGEERNELREALNGL  P DMGLIVRTAGLGRSSEEMQWDLD
Sbjct: 124  YLVLMPNNPRAGGISRRIEGEERNELREALNGLTVPGDMGLIVRTAGLGRSSEEMQWDLD 183

Query: 181  YLLQLWTAIKEASLDRSAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSVEAQDEALTFIR 240
            YLLQLWTAIKEASLDR+APFLIYQESNVIIRAIRDYLRQDIGEVLIDS++AQ+EALTFIR
Sbjct: 184  YLLQLWTAIKEASLDRAAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSIDAQEEALTFIR 243

Query: 241  QVMPQYASKIKLYEDSVPLFNRFQIESQIETAFQRVVELPSGGSIVIDPTEALVSIDINS 300
            QVMPQYASK+KLYEDSVPLFNRFQIESQIETAFQRVV+LPSGGSIVIDPTEALVSIDINS
Sbjct: 244  QVMPQYASKVKLYEDSVPLFNRFQIESQIETAFQRVVDLPSGGSIVIDPTEALVSIDINS 303

Query: 301  ARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEEKVREC 360
            ARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEE+VREC
Sbjct: 304  ARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEERVREC 363

Query: 361  LEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCNGTGIIRDVESLSLAILRL 420
            LEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRC+GTGIIRDVESLSLAILRL
Sbjct: 364  LEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCSGTGIIRDVESLSLAILRL 423

Query: 421  IEEEALKDRTAEVRAQVPIPVAAFLLNEKRNSITKIELRTRARIVILPNDHLETPHFEVQ 480
            IEEEALKDRTAEVRAQVPIPVAAFLLNEKRNSITKIELRTRARI+ILPNDHLETPHFEVQ
Sbjct: 424  IEEEALKDRTAEVRAQVPIPVAAFLLNEKRNSITKIELRTRARIIILPNDHLETPHFEVQ 483

Query: 481  RLRDDSPEAHSGQSSYEIAAAAAEVEEVQPAAATRTLVRQEAAVKTAPARANAPVPT--- 537
            RLRDD+PE  + QSSYEI  AAAE EE     ATRTLVRQEAAVKTAPARANAPVP    
Sbjct: 484  RLRDDNPEVLNNQSSYEI--AAAEAEEAPQPTATRTLVRQEAAVKTAPARANAPVPAAAE 541

Query: 538  --EVAAPVAAPAALPEPSLFKGLVKSLVSLFATKEEPVAPVV---VEKPATERPARNEER 592
              + AAPVA   + PEPSLFKGLVKSLVSLFA K+EP A  V    EKPA ER  RNEER
Sbjct: 542  EPQAAAPVAPAPSAPEPSLFKGLVKSLVSLFAGKDEPAAAPVAPAAEKPAAERSPRNEER 601

Query: 593  RNGRQQSRNRNGRRDEERKPRE---ERAPREERAPREERAPREPREETPTVERAPREERA 649
            RNGRQQSRNRNGRRDEERKPRE   ERAPREERAPREERAPRE  E  P  ERAPREERA
Sbjct: 602  RNGRQQSRNRNGRRDEERKPREERAERAPREERAPREERAPRE--ERAPREERAPREERA 659

Query: 650  PRTPRAPREDRKP-RGER-EERVRELREPLDAAPAA-------AGVAVAAEERPARQ--- 697
            PR  RAPR+ R+  RG R EERVRELREPLDA P A           VA EER  R+   
Sbjct: 660  PREERAPRQPREDRRGNRGEERVRELREPLDATPPAEREERQPREERVAREERAPREERA 719

Query: 698  ------------------------------------------PREERAPREERQPRAPRE 715
                                                      PREERAPREER PR PRE
Sbjct: 720  PREERAPREERAPREERAPREERAPREERAPREERAPREERAPREERAPREERAPRPPRE 779

Query: 716  ERQPRA-----EQAAAASDEEVLTGEEQLQEDGQEGAEGDRPRRRSRGQRRRSNRRERQR 770
            ERQPRA     EQAA  ++E+ L GEE LQ D QEG +G+RPRRRSRGQRRRSNRRERQR
Sbjct: 780  ERQPRAAEEATEQAAELAEEQ-LPGEELLQ-DEQEGTDGERPRRRSRGQRRRSNRRERQR 837

Query: 771  DANGNVIEGSEETGENTEAATSEPT--GAELAAGLAVTAAVASSVISAPAEAQAHEQAER 828
            +ANG +I+GSEE G   +    + T  GAELAAGLAVTAAVASS IS+ AEAQA++QAER
Sbjct: 838  NANGELIDGSEEEGSEEQPQQHQATELGAELAAGLAVTAAVASSNISSDAEAQANQQAER 897

Query: 829  ATAAVEDTVTVEAPVAETPAVE-APAVEAPVAETPVVEAS---AVEAPVVEATTPIEAPA 884
            ATA V       A VAET   E A  VE   A T   EAS   AVE PV E     EA A
Sbjct: 898  ATAEV-------AAVAETDNSEAAQPVEQVEAATKAQEASVAPAVEQPVTEPVAAAEATA 950

Query: 885  VPEVEVA--PVQEAQPEIEVAAVEQAPVVE---PQPVVEAAVVEAAPEVREVREEQTAFQ 939
             P VEVA  PV E  P +E   V +  V E     PVVEA  +E AP V EV        
Sbjct: 951  EPVVEVAPQPVAEDAPAVEPVVVAETAVTETPAEAPVVEAGEIEQAPAVVEV-------- 1002

Query: 940  WTAEPAAPVEAPEPAPVVEEAPAPVAEVVVAEPTP-VVEPAP-VVEPAPVVEAPVVAEVA 997
                  APV A +PAPVVE  P      VVAEP P VVEPAP VVEPA V+ A       
Sbjct: 1003 ------APV-AAQPAPVVEAQPE-----VVAEPAPAVVEPAPAVVEPATVMLA------- 1043

Query: 998  APVVEAAPVSALTENGRAPNDPREVRRRRKEAEAAAAAAAQEAEHESKP 1046
                          NGRAPNDPREVRRR++EAEAAA AA + A    +P
Sbjct: 1044 --------------NGRAPNDPREVRRRKREAEAAAKAAQEAAAASQEP 1078