Pairwise Alignments
Query, 1048 a.a., ribonuclease E from Pseudomonas simiae WCS417
Subject, 1126 a.a., Ribonuclease E from Alteromonas macleodii MIT1002
Score = 776 bits (2003), Expect = 0.0
Identities = 478/1054 (45%), Positives = 631/1054 (59%), Gaps = 80/1054 (7%)
Query: 1 MLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKGRITRIEPSLEAAFVDFGSE 60
MLINATQ EELRVALVDGQRLYDLDIES EQKKANIYKG+ITR+EPSLEAAFVD+G+E
Sbjct: 4 MLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRVEPSLEAAFVDYGAE 63
Query: 61 RHGFLPLKEISREYFKKAP--EGRVNIKDVLSEGQEVIVQVEKEERGNKGAALTTFISLA 118
RHGFLPLKEI+R YF K EGR NIKDV+ EGQEVIVQ++KEERG KGAALTTF+SLA
Sbjct: 64 RHGFLPLKEIARTYFPKGYKFEGRPNIKDVIKEGQEVIVQIDKEERGQKGAALTTFLSLA 123
Query: 119 GRYLVLMPNNPRAGGISRRIEGEERNELREALNGLIAPADMGLIVRTAGLGRSSEEMQWD 178
G YLVLMPNNPRAGGISRRIEG+ER EL+E+L+ L P MGLIVRTAG+G+S EE++WD
Sbjct: 124 GSYLVLMPNNPRAGGISRRIEGDERTELKESLSKLDLPEGMGLIVRTAGVGKSYEELEWD 183
Query: 179 LDYLLQLWTAIKEASLDRSAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSVEAQDEALTF 238
L LL W AI + +R APFLI+QESNVI+RAIRDYLR+DIGE+LID ++AL
Sbjct: 184 LKVLLTHWEAISSVAEEREAPFLIHQESNVIVRAIRDYLRRDIGEILIDKTSIYEQALQH 243
Query: 239 IRQVMPQYASKIKLYEDSVPLFNRFQIESQIETAFQRVVELPSGGSIVIDPTEALVSIDI 298
I+ V P +A+++KLY VPLF+ +QIESQIE+AFQR V LPSGGSIVIDPTEAL SIDI
Sbjct: 244 IQLVRPDFANRVKLYRGEVPLFSHYQIESQIESAFQREVRLPSGGSIVIDPTEALTSIDI 303
Query: 299 NSARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEEKVR 358
NSARATKG DIEETAL TNLEAA+EIARQLRLRD+GGL+VIDFIDMTP ++QR VE +++
Sbjct: 304 NSARATKGGDIEETALNTNLEAADEIARQLRLRDLGGLVVIDFIDMTPVRHQREVENRMK 363
Query: 359 ECLEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCNGTGIIRDVESLSLAIL 418
+ + +DRARVQ+GRISRFGLLEMSRQRLRPSLGES+ VCPRC+G G IR ESL+L+IL
Sbjct: 364 DAVRSDRARVQLGRISRFGLLEMSRQRLRPSLGESAHHVCPRCSGHGTIRGTESLALSIL 423
Query: 419 RLIEEEALKDRTAEVRAQVPIPVAAFLLNEKRNSITKIELRTRARIVILPNDHLETPHFE 478
R++EEE++K+ T ++ AQ+P+PVA +LLNEKR SI +E R ++++PN +L+TPH++
Sbjct: 424 RILEEESIKENTGQIEAQLPVPVATYLLNEKRKSIQLLEKRHGVDLLLIPNANLDTPHYQ 483
Query: 479 VQRLRDDSPEAHSGQSSYEIAAAAAEVEEVQPAAATRTLVRQEAAVK-TAPARANAPVPT 537
V R R D + SG +SY++ E+ PA T A VK PA PT
Sbjct: 484 VLRRRPD--DVISG-ASYDV--------ELMPAVEAETETTTSAPVKREEPALKGLVAPT 532
Query: 538 EVAAPVAAPAALPE------PSLFKGLVKSLVSLFATKEEPVAPVVVEKPATERPARNEE 591
AAPV AP P PSLF K + LF ++ E +KP + RN
Sbjct: 533 --AAPVVAPKEEPAKKADDVPSLFARFGKWISDLFGSESEEETN-KDKKPQSGNKNRNNR 589
Query: 592 RRNG---RQQSRNRNGRRDEERKPREERAPREERAPREERAPREPREETPTVERAPREER 648
RN R++ RN+N RR + + R++ +++ E+ R+PR + +R ++++
Sbjct: 590 SRNNDDRRRKPRNKNNRRGNQSQNRDQ--GKDQNRDGEQNDNRKPRGDQQRDQRQDQDDK 647
Query: 649 APRTPRAPREDRKPRGEREERVRELREPLDAAPAAAGVAVAAEERPARQPRE-------- 700
R PR+ ++PR E+++ E ++ A AE R R R
Sbjct: 648 RNNKGRKPRKAQQPRDEQQKPKHEKQDGEQQENQAQKKREVAERRKRRDKRRSVRVKKDD 707
Query: 701 -----------ERAP--REERQPRAPREERQPRAEQAAAASDEEVLTGEEQLQEDGQEGA 747
+ AP +E + + +P+A +A + + T E++ E
Sbjct: 708 NGATTVEQNEAQAAPVVKEAPSQHKAKADTKPKAPKAESPVEN---TAEQKKDEQKPAVK 764
Query: 748 EGDRPRRRSRGQRRRSNRRERQRDANGNVIEGSEETGENTEAATS------EPTGAELAA 801
+P + + S+ + + D++ + + T NT+A + E G +
Sbjct: 765 AAQKPADKPAEAKPVSDAVKGEGDSSAITSDAVDGTDANTDANSEEHGQKREGRGRSRRS 824
Query: 802 GLAVTAA----VASSVISAPAEAQAHEQAE----RATAAVEDTVTVEAPVAETPAVEAPA 853
V AA S ++ QA + E + A VE T +APV E + P
Sbjct: 825 PRHVRAAGQRRKKESQQVDDSDTQAKQPGELSPQQPEAEVEATAKTDAPVVEETQAKEPG 884
Query: 854 VEAPVAETPVVEASAVEAPVVEATTPIEAPAVPEVEVAPVQEAQPEIEVAAVEQAPVVEP 913
AP E PV + + V ++ A P P +A+P A + + V+
Sbjct: 885 QLAPAEEQPVSKQEKAKLDVEAVQDELQFDAEPLAGNKPSADAEPS---ANDKPSEAVDS 941
Query: 914 QPVVEAAVVEAAPEVREVREEQTAFQWTAEPAAPVEAPEPAPVVEEAPAPVAEVVVAEPT 973
V +A A E + +E QT+ Q + E AP + PA A+ A+
Sbjct: 942 TDEVTSADDNATTEAKPAKEAQTSVQES-------NVEETAPAAQTEPAVEAKTTQADTA 994
Query: 974 PVVEPAPVVEPAPV----VEAPVVAEVAAPVVEA 1003
P + P V +APVVAE A V EA
Sbjct: 995 PEAKDEATASPEQVEINLADAPVVAEPEAQVQEA 1028