Pairwise Alignments

Query, 319 a.a., 23S rRNA pseudouridylate synthase from Pseudomonas simiae WCS417

Subject, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

 Score =  550 bits (1418), Expect = e-161
 Identities = 270/316 (85%), Positives = 295/316 (93%)

Query: 1   MTTTAPQTPSVQLLEVSPEYAGQRIDNFLLARLKGVPKTLIYRILRKGEVRVNKGRIKPE 60
           MTT  P T  VQL+EV+PE AGQRIDNFL+  LKGVPKTL+YRILRKGEVRVNKGR+KPE
Sbjct: 1   MTTNTPPTSGVQLIEVAPELAGQRIDNFLITALKGVPKTLVYRILRKGEVRVNKGRVKPE 60

Query: 61  YKLQAGDIVRVPPVRVPERDEPVPLAQGLLQRLEASIIFEDNKLIVINKPCGIAVHGGSG 120
           YK+QAGDIVRVPPVR+PERDEP P+AQGLLQRLEA+I++ED  LIV+NKP GIAVHGGSG
Sbjct: 61  YKIQAGDIVRVPPVRLPERDEPAPVAQGLLQRLEAAIVYEDKALIVMNKPAGIAVHGGSG 120

Query: 121 LNFGVIEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHTALRGDGVDKRYMA 180
           L+FGVIEA RQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLH ALRGDGVDKRYMA
Sbjct: 121 LSFGVIEALRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYMA 180

Query: 181 LVRGNWASSIKSVRAPLQKSNLRSGERMVEVDEEGKEALTLFKVLRRFGDFATMVEAKPV 240
           LVRG+W +S K V APL KSNLRSGERMVEV+EEGKEALTLF+VLRRFGDFAT+VEA+P+
Sbjct: 181 LVRGHWPTSKKQVNAPLLKSNLRSGERMVEVNEEGKEALTLFRVLRRFGDFATIVEARPI 240

Query: 241 TGRTHQIRVHTLHAGHCIAGDTKYGDEDFSKEIRDLGGKRLFLHAYMLTVPLPDGGELKL 300
           TGRTHQIRVHTLHAGH IAGD+KYGDEDFS+EIR+LGGKRLFLHAY LTVPLPDGGELKL
Sbjct: 241 TGRTHQIRVHTLHAGHMIAGDSKYGDEDFSREIRELGGKRLFLHAYALTVPLPDGGELKL 300

Query: 301 QAPVDEMWAKTVERLS 316
           +APVDE+WAKTVERLS
Sbjct: 301 EAPVDEVWAKTVERLS 316