Pairwise Alignments

Query, 319 a.a., 23S rRNA pseudouridylate synthase from Pseudomonas simiae WCS417

Subject, 357 a.a., RluA family pseudouridine synthase from Phocaeicola dorei CL03T12C01

 Score =  127 bits (318), Expect = 5e-34
 Identities = 82/257 (31%), Positives = 130/257 (50%), Gaps = 16/257 (6%)

Query: 24  RIDNFLLARLKGVPKTLIYRILRKGEVRVNKGRIKPEYKLQAGDIVRVPPVRVPERDEPV 83
           R+D +L  RL    +  I +    G +  N   +K  YK++  D++ V   R    ++ +
Sbjct: 42  RVDKYLFERLVNSSRNRIQKAADAGLIMANGKPVKSSYKVKPCDVLTVMMDRPRYDNDII 101

Query: 84  PLAQGLLQRLEASIIFEDNKLIVINKPCGIAVHGGSGLNFGVI--------EAFRQLRPD 135
           P      + +   I++EDN L+VINKP G+ VH G G   G +        +   +  P+
Sbjct: 102 P------EDIPLDIVYEDNDLMVINKPAGLVVHPGCGNYHGTLVNAIAWHLKDNPRYDPN 155

Query: 136 AKELELVHRLDRDTSGLLMIAKKRSMLRHLHTALRGDGVDKRYMALVRGNWASSIKSVRA 195
             ++ LVHR+D+DTSGLL++AK      HL          ++Y ALV G   ++  ++  
Sbjct: 156 DPQVGLVHRIDKDTSGLLVVAKTPDAKTHLGLQFYNKTTKRKYNALVWGIVENNEGTIEG 215

Query: 196 PLQKSNLRSGERMVEVDE-EGKEALTLFKVLRRFGDFATMVEAKPVTGRTHQIRVHTLHA 254
            + ++     +  V  D  +GK A+T ++VL R G + T+VE    TGRTHQIRVH  H 
Sbjct: 216 NIGRNPKDRMQMAVLSDPAQGKHAVTHYRVLERLG-YVTLVECVLETGRTHQIRVHMKHI 274

Query: 255 GHCIAGDTKYGDEDFSK 271
           GH +  D +YG  +  K
Sbjct: 275 GHTLFNDERYGGNEILK 291