Pairwise Alignments

Query, 329 a.a., DNA polymerase III subunit delta' from Pseudomonas simiae WCS417

Subject, 337 a.a., DNA polymerase III delta prime subunit (EC 2.7.7.7) from Variovorax sp. SCN45

 Score =  131 bits (330), Expect = 2e-35
 Identities = 84/213 (39%), Positives = 113/213 (53%), Gaps = 28/213 (13%)

Query: 20  QHAHAYLLHGPVGIGKRDLAERLMASLLCQRPV-NLEACGECKSCLLLKAGSHPDNYLLE 78
           Q  HA+LL GP GIG+ +LA  L ++ LC++P     ACG C SC  ++  +H D  +L 
Sbjct: 20  QRGHAWLLQGPSGIGQYELALALASAWLCEQPTAEGTACGHCASCHAIEVRTHADLCVLM 79

Query: 79  PE-----------------------EADKAIKVDQVRDLVSFVVQTAQMGGRKVVLIEPV 115
           PE                       +A + I+V+ +RD V F  +T+  G  KVVL+ P 
Sbjct: 80  PEVAMQELGWPLDEKAQADIDDKKRKASREIRVEAMRDAVGFAQRTSARGRGKVVLVYPA 139

Query: 116 EAMNINAANALLKSLEEPSGDTVLLLVSHQSSRLLPTIRSRCVQQACPLPSEAMSLEWL- 174
           E MN   ANALLK+LEEP GD   +L S  + +LLPTIRSRC+    P P  A +  WL 
Sbjct: 140 ERMNTITANALLKTLEEPVGDVRFVLASEAAWQLLPTIRSRCLGFTLPWPETAEAEAWLA 199

Query: 175 AQALPACSQDERVELLTLAAGSPLAAVKLQAQG 207
           AQ +PA    +   LL  A G P  A++L   G
Sbjct: 200 AQDVPAA---DAAALLRAAGGRPSDALRLARSG 229