Pairwise Alignments

Query, 297 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 347 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  148 bits (373), Expect = 2e-40
 Identities = 97/288 (33%), Positives = 150/288 (52%), Gaps = 9/288 (3%)

Query: 8   DANATLVALIEGLTPC-DGFSPTNLPGVQVLRASCDVARGPQIYEPSLMFVAQGSKVAYL 66
           DA   LV+L++ +    DG   T +PG+ V   S           P+L  +AQGSK   +
Sbjct: 41  DARKELVSLLKHIMGGQDGTVITAVPGLHVFCISKPEGPKHAFASPALGLIAQGSKRIIV 100

Query: 67  GPRTLEYGAGHYLIQAMPVPFECETFAMAPDAPLLGVTVGIDRVVLGELVMAMGIQA--- 123
           G     Y   HYL+ ++ +P   +    + + P LG+ + +    +GEL+    + A   
Sbjct: 101 GDDIYVYDPMHYLVTSVDLPVCGQVRVASNNEPYLGLRLELALDDIGELIRDDKLPAKAN 160

Query: 124 GPPPTAQTLESMSSVVLDDAMRGCVERLLQCLHDPLESRIMGPARVRELLFTALRGPQAD 183
            P      +  ++  VL+  +R     LL+ L  P +  IM P   RE+++  L   +  
Sbjct: 161 APASRGMYVNRIAMPVLEPVLR-----LLRLLDTPEDVPIMAPLIKREIMYRLLVNGEGA 215

Query: 184 VLRALVEQQGQFSRIATSLNHLHAHYAEPLNIETLAGYAHMSASTFHEHFKRCTLLSPVQ 243
            LR +  Q     RIA +++ L  +YA+ L +E +A   HMS S+FH HFK  T +SP+Q
Sbjct: 216 RLRQIALQDSHTQRIAKAISALRVNYAQSLRVEDMARAVHMSVSSFHHHFKAVTAMSPLQ 275

Query: 244 YLKRLRLLKAQQLLLVEGMGVAQAAHSVGYQSTSQFSREYKRYFERNP 291
           Y K+LRL +A++ +L+ G  VA AAH+VGY+S SQF+REY R F   P
Sbjct: 276 YQKQLRLQEARRQMLIAGADVASAAHNVGYESPSQFAREYGRMFGAPP 323