Pairwise Alignments

Query, 297 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 318 a.a., transcriptional activator of yqhD from Escherichia coli BL21

 Score =  202 bits (515), Expect = 6e-57
 Identities = 109/266 (40%), Positives = 158/266 (59%), Gaps = 2/266 (0%)

Query: 31  LPGVQVLRASCDVARGPQIYEPSLMFVAQGSKVAYLGPRTLEYGAGHYLIQAMPVPFECE 90
           LP V++L      AR P +YEP ++ +  G K+ Y+  R   Y A  YL+  +P+PFECE
Sbjct: 47  LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106

Query: 91  TFAMAPDAPLLGVTVGIDRVVLGELVMAMGIQAGPPPTAQTLESMSSVVLDDAMRGCVER 150
           T+A + + PL G+ + +D + L EL+M +G      P+      ++S  L + +    ER
Sbjct: 107 TYATS-EVPLAGLRLNVDILQLQELLMDIGEDEHFQPS-MAASGINSATLSEEILCAAER 164

Query: 151 LLQCLHDPLESRIMGPARVRELLFTALRGPQADVLRALVEQQGQFSRIATSLNHLHAHYA 210
           LL  +  PL++RI+G   +RE+L+  L GP    L ALV +Q  FS I+  L  +   Y 
Sbjct: 165 LLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYT 224

Query: 211 EPLNIETLAGYAHMSASTFHEHFKRCTLLSPVQYLKRLRLLKAQQLLLVEGMGVAQAAHS 270
           E L++E LA  A+MS S FH +FK  T  SP+QYLK  RL KA+ +++ +GM  + AA  
Sbjct: 225 ENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMR 284

Query: 271 VGYQSTSQFSREYKRYFERNPGEERA 296
           VGY+S SQFSRE+KRYF   PGE+ A
Sbjct: 285 VGYESASQFSREFKRYFGVTPGEDAA 310