Pairwise Alignments

Query, 271 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 257 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  139 bits (351), Expect = 5e-38
 Identities = 88/254 (34%), Positives = 139/254 (54%), Gaps = 12/254 (4%)

Query: 18  VLGGCASHPDSEQALQQAGNDFQQVKEDANVLRFAPKDVIRAGESLARADRLSSYWGSGA 77
           V  GCA+ P++ Q LQ A + F  ++E       A  +   A  +L RA+++S +  +  
Sbjct: 16  VFAGCATPPENPQLLQ-ARSLFSSLQEKPESNTLAAVETRIASNALDRANQVSLHDRTDP 74

Query: 78  DVVHYAYLSQRYSAIAREHTEQALNQERGAKLELERQRLQLALRENKLISVQQQGKWLEE 137
            +   AYL+ +  A+A +         +   + ++R ++QL +R  +L ++Q        
Sbjct: 75  QIDQLAYLATQKIALAEQTIVGRKTDAQLDNIAVDRTQVQLDVRTAQLKALQ-------- 126

Query: 138 QIASLATTQTDRGLVMTLGDVLFDTGEAELKNSANRTVLKIVQFLQLNPKRVVRIEGYAD 197
              ++    T+RG V+T GDVLFDTG+A+LK  + R    +  FL  NP+R VR+EG+ D
Sbjct: 127 ---AMKAQPTERGQVITFGDVLFDTGKADLKAGSQRDFQGLANFLVQNPERQVRVEGFTD 183

Query: 198 NTGGERENLKLSRDRAQSVADVLVDLGIDEKRIQVEGYGDQYPVEANASERGRAQNRRVE 257
           + GG+  N  LS  RAQ+VA  L  LG+  +RI V GYG Q+PV  N S + R  NRRVE
Sbjct: 184 SVGGDAYNQSLSERRAQAVARGLQRLGVGIERIAVIGYGKQFPVADNQSAQSRQLNRRVE 243

Query: 258 IVFSDEKGQLGAAR 271
           ++ S++   + A R
Sbjct: 244 VIVSNDASAVSARR 257