Pairwise Alignments

Query, 181 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 214 a.a., Transmembrane protein from Variovorax sp. SCN45

 Score = 74.7 bits (182), Expect = 1e-18
 Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 13/185 (7%)

Query: 1   MSRLIGLGLLLAGLLYPFAVYYGTEHFAPWQFGLLLGGLWLLRTLTGARRPGSRW----- 55
           ++ L+ LG+  AGL +   +++ TE   PW   +LLG LWL      A R G RW     
Sbjct: 6   LALLLLLGVAYAGLSHWMTLFHATE---PWAVVVLLGPLWLAAVGFAASRFG-RWGCAGA 61

Query: 56  --MALAVMVFCLLLAWFDNPHLLRWYPSLVSGFMLALFGLSLK-YGPPMVERLARMTDPV 112
             + +A  V   L    D   L  +    ++  +   FG +L+  G P++ + A+   P 
Sbjct: 62  VLLGIAGFVLVFLGEAGDPNRLYVFQHVAINALLCGWFGSTLRGQGLPLITQFAQRVHP- 120

Query: 113 LPAQAIVYTRQVTVVWSVFFLCNGLLAAALTLWAPLSWWTLYNGLIAYGLMGLLFAVEWL 172
           L    + YT Q+T +W+ +F    L + A+ L  P S W+L+  +++  ++G+LF  E L
Sbjct: 121 LKGHMLAYTTQLTRIWTAYFAVVVLASIAIYLTRPFSDWSLFANVLSPVMVGVLFVGEHL 180

Query: 173 VRQRV 177
           VR R+
Sbjct: 181 VRYRL 185