Pairwise Alignments

Query, 509 a.a., nitrate reductase from Pseudomonas simiae WCS417

Subject, 484 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

 Score =  211 bits (538), Expect = 4e-59
 Identities = 137/478 (28%), Positives = 233/478 (48%), Gaps = 19/478 (3%)

Query: 33  RLHNKDLAPTKVEGRRWGRYSIFALWTNDVHNIANYSFAIGLYALGLGGWQILLSLGIGA 92
           R +++DL P     R W  ++ F LW   VHN+ NY    G + LGL  + I+L++ + A
Sbjct: 11  RGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFSIMLAIILSA 70

Query: 93  ALVYFFMNLSGYMGQKTGVPFPVMSRISFGIHGAQIPALIR-AVIAIAWFGIQTYLASVV 151
             +   M L+G  G K GVPF ++ R S+G+ GA  P L+R  + AI WFG+Q Y  S+ 
Sbjct: 71  FFIAAVMVLNGAAGSKYGVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLA 130

Query: 152 FRVLLTAIHPGFADYDHN-SILGLSSLGWACFVAIWLVQLVILAYGMEMVRRYEGFAGPV 210
             +L+  I PGF     + ++LGLS  G   F+  WLV + I   G +++ ++     P 
Sbjct: 131 CLILIGKIWPGFLTLGGDFTLLGLSLPGLITFLIFWLVNVGIGFGGGKVLNKFTAILNPC 190

Query: 211 ILLTVASLAGWMYFQTG-GNIAWSIRDPLSGGEMWRNIFAGGALWLAIYGTLI------- 262
           I +    +A W     G G I   I   +   E       GG L+L +   ++       
Sbjct: 191 IYIVFGGMAIWAISLVGIGPIFDYIPSGIQKAE------NGGFLFLVVINAVVAVWAAPA 244

Query: 263 LNFCDFARSSPCRKTIQVGNFWGLPVNILVFAAITVLLCGGQFQLNGRVIESPTEIIAAI 322
           ++  DF +++   +   +G   GL V  ++FA   V +  G     G    +  +I+   
Sbjct: 245 VSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDIVQRW 304

Query: 323 PSTFFLVLGCLAFLIVTVAVNIMANFVAPAFVLSNLAPKYLNFRRAGLISATVAVLILPW 382
            S F      L  L+ T++ N   N +   + ++ +AP  L ++   LI++ +++LI PW
Sbjct: 305 DSLFASFFAVLVILMTTISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLLICPW 364

Query: 383 NLYNSPLVIVYFLSGLGALLGPLYGVIMVDYWLIRKSRVDVLQLYSEDPNGVYYYSRGVN 442
            L  +   I  FL  +G +LGP+ GV+M  Y+++ + ++++ +LY+  P    YY  G N
Sbjct: 365 KLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMRGQINLDELYTA-PGDYKYYDNGFN 423

Query: 443 LRAVAAFIPAAVIAILLALLPGFASVSPFSWMFGAGIAGLLYLLIAKRQPFYADVSGE 500
           L A +  + A ++++    +     +S  SW  G  +A   Y L+ KR    A+ +GE
Sbjct: 424 LTAFSVTLVAVILSLGGKFIHFMEPLSRVSWFVGVIVAFAAYALLKKRTT--AEKTGE 479