Pairwise Alignments

Query, 556 a.a., AMP-binding protein from Pseudomonas simiae WCS417

Subject, 4293 a.a., peptide synthase from Pseudomonas simiae WCS417

 Score = 60.1 bits (144), Expect = 2e-12
 Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 7/133 (5%)

Query: 304  PEGHIEQTADAARIHADGRFELLGRLDRIVKLEEKRISLPMLEHALMTHPWVAETRLGVV 363
            P   + +T D AR  +DG  E +GR+D  VK+   RI L  +E  L   P V +  +GV 
Sbjct: 4058 PGERLYRTGDLARRRSDGVLEYVGRVDHQVKIRGYRIELGEIEARLHEQPEVRDAAVGVQ 4117

Query: 364  Q-ENRASLGALVVLSDEGLHALRNQGRRTLTQTLRQHLSQHCEALALPRRWRLLRQLPLN 422
            +  N   L   +V +DE L+      R  + Q LR  L ++     +P  W  L +LPLN
Sbjct: 4118 EGMNGKHLVGYLVAADEALNPSERLDR--IKQRLRAELPEY----MVPLHWLWLDRLPLN 4171

Query: 423  SQGKLPQAQVEGL 435
            + GKL +  +  L
Sbjct: 4172 ANGKLDRKALPAL 4184



 Score = 56.6 bits (135), Expect = 2e-11
 Identities = 118/510 (23%), Positives = 185/510 (36%), Gaps = 90/510 (17%)

Query: 24   AMDHAQLWAQSLSLAAGLQARGIQR---LAVYLEDAGLLAIALLGAWRAGVSVLLPADLQ 80
            ++  AQL  Q+  LA  L+ +G+     +A+  E +  L I LL   +AG    +P D  
Sbjct: 1141 SLTFAQLHTQANRLAHYLRDKGVGPDVCVAIAAERSPQLLIGLLAIIKAG-GAYVPLDPD 1199

Query: 81   -PQTRQRW---DAAVDAWLTEAADLDA----------------LFQTPLSPAALDL--DS 118
             P  R  +   D+ V   LT+ A L+                 L   P  P  L L  D+
Sbjct: 1200 YPTERLAYMLKDSGVHLLLTQTALLEQVPAACGVCVIAMDSLHLDSWPTQPPGLHLHGDN 1259

Query: 119  CQLSLCTSGSSGEPKRINKTLRQLANEVEALETLWGPDLKDACIIGSVATQHIYGLLFRV 178
                + TSGS+G+PK +  T   LA  ++ ++  +   L +  ++   A       ++  
Sbjct: 1260 LAYVIYTSGSTGQPKGVGITHAALAERLQWMQATY--PLNETDVLMQKAPISFDVSVWEC 1317

Query: 179  LWPLCAGRTFVRK---QLAFPEDLQRASREHTHFAWVASPALLKRMGDNLDWPALSQVSR 235
             WPL  G   V     +   P  + +  +EH        P LL+   D       + + R
Sbjct: 1318 FWPLITGCRLVLAGPGEHRDPHRIAQLVQEHGVTTLHFVPPLLQLFIDEPLVAECTSLRR 1377

Query: 236  VFSSGGALPVEAAGSLYDRLQQWPTEIL----GSSET----------------------- 268
            +FS G ALP E    +   L Q P   L    G +ET                       
Sbjct: 1378 LFSGGEALPAELRNRV---LAQLPAVQLHNRYGPTETAINVTHWHCRAEDGERSPIGRPL 1434

Query: 269  GGIAWRQGAQPWQPFADVHLSQDADGALRIASPYLPE--------------GHIEQTADA 314
            G +  R   +   P       +   G + +A  YL                  + +T D 
Sbjct: 1435 GNVICRVLDEQLNPVPLGVPGELCIGGIGLARGYLGRAGLTAERFVADHQGARLYRTGDR 1494

Query: 315  ARIHADGRFELLGRLDRIVKLEEKRISLPMLEHALMTHPWVAETRLGVVQENRASLGALV 374
            AR  ADG  E LGRLD+ VKL   R+    +E  ++    +A+              A+V
Sbjct: 1495 ARWSADGVIEYLGRLDQQVKLRGFRVEPEEIEARMLALEGIAQ--------------AVV 1540

Query: 375  VLSDEGLHALRNQGRRTLTQTLRQHLSQHCEALALPRRWRLLRQLPLNSQGKLP-QAQVE 433
            ++ D  L            Q ++  L+       +P     L  +PL+  GKL  +A  E
Sbjct: 1541 LVRDGQLIGYFTAHGDLDEQQVKTALAAELPEYMVPALLMRLDAMPLSPSGKLDRRALPE 1600

Query: 434  GLLLASRPKAPEVLEQVEANGEWTLQLSVP 463
             +        PE   Q +    W   L +P
Sbjct: 1601 PVWQVREHVEPETPLQQQIAAIWREVLGLP 1630



 Score = 52.0 bits (123), Expect = 5e-10
 Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 9/131 (6%)

Query: 298  IASPYLPEG-HIEQTADAARIHADGRFELLGRLDRIVKLEEKRISLPMLEHALMTHPWVA 356
            +A P+   G  + +T D  R   DG  E LGR+D  VK+   RI L  +E  L+ H  V 
Sbjct: 2534 VADPFARNGGRLYRTGDLVRQRVDGLVEYLGRIDHQVKIRGFRIELGEIETRLLEHDAVR 2593

Query: 357  ETRLGVVQENRASLGALVVLSDEGLHALRNQGRRTLTQTLRQHLSQHCEALALPRRWRLL 416
            E  +  +           ++SD    ALR+         L+ HL  H     +P    +L
Sbjct: 2594 EAVVLALDAPSGKQLVAYLVSDAEHVALRD--------ALKAHLKAHLPDYMVPAHLIVL 2645

Query: 417  RQLPLNSQGKL 427
              +PL + GKL
Sbjct: 2646 DSMPLTANGKL 2656