Pairwise Alignments

Query, 556 a.a., AMP-binding protein from Pseudomonas simiae WCS417

Subject, 2139 a.a., peptide synthetase from Pseudomonas simiae WCS417

 Score = 66.6 bits (161), Expect = 9e-15
 Identities = 135/520 (25%), Positives = 187/520 (35%), Gaps = 112/520 (21%)

Query: 28   AQLWAQSLSLAAGLQARGIQRLAVYLEDAG-----LLAIAL----------LGAWRAGVS 72
            A LW +  +L  G  A    R+A  L DAG     L+A++L          LG   AG +
Sbjct: 1583 ALLWGEHGTLKYGELADRALRIAHSLMDAGVAPGDLVAVSLAKGPQQVACVLGILAAGAA 1642

Query: 73   VLLPADLQPQTR-QR--WDAAVDAWLTE----------AADLDALFQTPLS-PAALDLDS 118
             L     QP  R QR    A V   L E               AL   PL+ P  L    
Sbjct: 1643 YLPVGVDQPLQRCQRILQQAGVTLMLAEHDPQLPGVKHLNPSSALKAEPLAAPRPLAAGE 1702

Query: 119  CQLSLCTSGSSGEPKRINKTLRQLANEVEALETLWGPDLKDACIIGS-----VATQHIYG 173
                + TSGS+G+PK +  T R   N V  +   +     D  +  S     ++   ++G
Sbjct: 1703 LAYVIYTSGSTGQPKGVEITHRAAMNTVADINRRYDVQATDRGLALSALDFDLSVYDLFG 1762

Query: 174  LLFRVLWPLCAGRTFVRKQLAFPEDLQRASR-------EHTHFAWVASPALLKRMGD-NL 225
            LL         G   V       ED +R +R       +H    W + PALL  + + N 
Sbjct: 1763 LL-------SVGGALV----LIDEDQRRDARAWLKALQQHRVTLWNSVPALLDMLLEANA 1811

Query: 226  DWPALSQVSRVFSSGGALPVEAAGSLYDRLQQWPTEILGSSETGGIAWRQGAQPWQPFAD 285
                   +     SG  + ++    L D+        LG +    I W    +   P   
Sbjct: 1812 QDRQRLDLKVALLSGDWIGLDLPQRLQDQAPSCRFIALGGATEAAI-WSNHFEVQPPLPG 1870

Query: 286  -------VHLSQDA---------------DGALRIASPYLPEGHIE-------------- 309
                   V L+  A                G L I    +  G+                
Sbjct: 1871 WRSIPYGVPLTNQAYRVVDALGRDCPDWVTGELWIGGAGVARGYRHAPQLNAERFVDGWY 1930

Query: 310  QTADAARIHADGRFELLGRLDRIVKLEEKRISLPMLEHALMTHPWVAETRLGVVQENRAS 369
            +T D  R H DG  E LGR D  VK+   RI L  +E AL  HP V  + + +V +NR  
Sbjct: 1931 RTGDLGRYHPDGLLEFLGRADSQVKIGGHRIELGEIEAALARHPCV-NSAVALVVDNR-- 1987

Query: 370  LGALVVLSDEGLHALRNQGRRTLTQTLRQHLSQHCEALALPRRWRLLRQLPLNSQGKLPQ 429
            L A V  S             T  + L QHL Q   A   P +  +L +LPLNS GK+ +
Sbjct: 1988 LMAAVTAS-------------TCAEVLAQHLEQCLPAYMRPEQVLVLERLPLNSNGKVDR 2034

Query: 430  AQVEGLLLASRPKAPEVLEQVEANGE------WTLQLSVP 463
              +   L A+      + EQ  + GE      W   L VP
Sbjct: 2035 RALLAPLTAAAQSRVALDEQPLSAGEHVIAELWQHLLKVP 2074



 Score = 42.0 bits (97), Expect = 2e-07
 Identities = 39/134 (29%), Positives = 54/134 (40%), Gaps = 16/134 (11%)

Query: 310  QTADAARIHADGRFELLGRLDRIVKLEEKRISLPMLEHALMTHPWVAETRLGVVQENRAS 369
            +T D AR H DG  E LGR D  +KL   RI    +E AL+  P V              
Sbjct: 903  RTGDRARYHPDGNVEFLGRTDFQLKLHGYRIEAGEVEQALLACPGVEH------------ 950

Query: 370  LGALVVLSDEGLHALRNQ--GRRTLTQTLRQHLSQHCEALALPRRWRLLRQLPLNSQGKL 427
              A+V+L+ + L A+  Q  G           L++   A  +P       QLPL   GK+
Sbjct: 951  --AVVLLAGQQLAAVVRQAHGPAQPAPIDLPGLAERLPAYMIPTFILGCAQLPLTGNGKV 1008

Query: 428  PQAQVEGLLLASRP 441
             +  +   L    P
Sbjct: 1009 DRKALHAWLAQHSP 1022



 Score = 35.8 bits (81), Expect = 2e-05
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 9/134 (6%)

Query: 23  PAMDHAQLWAQSLSLAAGLQARGIQR---LAVYLEDAGLLAIALLGAWRAGVSVLLPADL 79
           P + + +L  ++L LAA L+ +GI+R   +A+ L       IA+LG      + L     
Sbjct: 572 PVISYGELAERALQLAAYLEDQGIRRGDVVALQLPKGPEQVIAVLGILACSATYLPIGID 631

Query: 80  QPQTRQR--WDAAVDAWLTEAADLDA-LFQTPLSPAALDLDSCQLSLCTSGSSGEPKRIN 136
           QP+ R +   D +    L +A   +    + P   A  DL      L TSGS+G+PK + 
Sbjct: 632 QPEARCQKICDGSGARLLLKALPSEGPALEAPRPGAISDL---AYILYTSGSTGDPKGVE 688

Query: 137 KTLRQLANEVEALE 150
            +    AN ++ L+
Sbjct: 689 ISHLAAANTLDDLQ 702