Pairwise Alignments

Query, 556 a.a., AMP-binding protein from Pseudomonas simiae WCS417

Subject, 3949 a.a., peptide synthase from Pseudomonas simiae WCS417

 Score = 68.2 bits (165), Expect = 6e-15
 Identities = 97/439 (22%), Positives = 159/439 (36%), Gaps = 111/439 (25%)

Query: 92   DAWLTEAADLDALFQTPLSPAALDLDSCQLSLCTSGSSGEPKRINKTLRQLANEVEALET 151
            D WL   A+     Q PL    +D ++    + TSGS+G+PK        L N +  ++ 
Sbjct: 3211 DEWLQAYAE-----QNPL--VTVDGENLAYVIYTSGSTGQPKGAGNRHSALTNRLCWMQH 3263

Query: 152  LWGPDLKDACIIGSVATQHIYGLLFRVLWPLCAGRTFVRKQLAFPEDLQRASR------- 204
             +G +  D  +  +  +  +   ++   WPL  G   V   +A P D +  +R       
Sbjct: 3264 AYGLEGSDTVLQKTPFSFDVS--VWEFFWPLMTGARLV---VAAPGDHRDPARLVSLINA 3318

Query: 205  EHT---HFAWVASPALLKRMGDNLDWPALSQVSRVFSSGGALPVEAAGSLYDRLQQ---- 257
            EH    HF     P++L+    +    A   + R+  SG ALPV+A   ++ +L      
Sbjct: 3319 EHVTTLHFV----PSMLQAFLQDAGVGACHSLQRIVCSGEALPVDAQQQVFAKLPHAGLY 3374

Query: 258  --------------W-------------------------------PTEILGSSETGGIA 272
                          W                               P  +LG    GG+ 
Sbjct: 3375 NLYGPTEAAIDVTHWTCVDEGRDAVPIGRPIANLGCYVLDGNLEPAPVGVLGELYLGGVG 3434

Query: 273  WRQGAQPWQPFADVHLSQDADGALRIASPYLPEGHIEQTADAARIHADGRFELLGRLDRI 332
              +G          H          +  P+     + +T D AR   DG  E  GR+D  
Sbjct: 3435 LARG---------YHRRPALTAERFVTDPFGSGSRLYRTGDLARYRDDGVIEYAGRIDHQ 3485

Query: 333  VKLEEKRISLPMLEHALMTHPWVAETRLGVVQENRASLGALVVLSDEGLHALRNQGRRTL 392
            VKL   RI L  +E  L+ H  V E                 VL+ +G H +     +  
Sbjct: 3486 VKLRGLRIELGEIEARLLEHACVREA---------------AVLAVDGTHLVGYLVLQAP 3530

Query: 393  TQTLRQHLSQHCEA----LALPRRWRLLRQLPLNSQGK-----LPQAQVEGLLLASRPKA 443
            ++  +  ++ H  A      +P +W +L Q+PL+  GK     LP+ + +G   A   +A
Sbjct: 3531 SEDWKAQVAMHLAAQLPDYMVPAQWVVLTQMPLSPNGKLDRKALPKPEAQG---AGAYQA 3587

Query: 444  PEVLEQVEANGEWTLQLSV 462
            P+   + +    W   L V
Sbjct: 3588 PQSAIEQQVAAIWRDVLGV 3606



 Score = 50.8 bits (120), Expect = 1e-09
 Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 11/169 (6%)

Query: 298  IASPYLPEGH-IEQTADAARIHADGRFELLGRLDRIVKLEEKRISLPMLEHALMTHPWVA 356
            +A P+   G  + +T D AR  ADG  E +GR+D  VK+   RI L  +E  L+    V 
Sbjct: 877  VADPFSTLGERLYRTGDLARYRADGVIEYVGRVDHQVKIRGFRIELGEIEALLLAQEAVR 936

Query: 357  ETRLGVVQENRASLGALVVLSDEGLHALRNQGRRTLTQTLRQHLSQHCEALALPRRWRLL 416
            E  L +  +N+  L A +V +     A +     TL  TLR+ L  +     +P     L
Sbjct: 937  EAFL-LAADNQ--LVAYLVPAQPLSAAEQAAAGETLKATLREQLPDY----MVPAHLIFL 989

Query: 417  RQLPLNSQGKLPQAQV---EGLLLASRPKAPEVLEQVEANGEWTLQLSV 462
             ++PLN  GKL +  +   +G  +    +AP    Q +    W   L V
Sbjct: 990  DRMPLNPNGKLDRQALPKPDGSAVQQAWQAPVTPRQQQVAAIWADILGV 1038



 Score = 43.9 bits (102), Expect = 1e-07
 Identities = 113/487 (23%), Positives = 180/487 (36%), Gaps = 92/487 (18%)

Query: 22   EPAMDHAQLWAQSLSLAAGLQARGIQ---RLAVYLEDAGLLAIALLGAWRAGVSVLLPAD 78
            E  + + +L  Q+  LA  L ARG+    R+A+ +  +  + +A L   +AG  V +P D
Sbjct: 1589 EQQLTYGELDRQANRLAHALIARGVGPEVRVAIAMPRSAEIMVAFLAVMKAG-GVYVPLD 1647

Query: 79   LQ-PQTRQRW---DAAVDAWLTEAA---------DLDALF--QTPLSPA--------ALD 115
            ++ P+ R  +   D+     LT +           L+AL   QT    A         LD
Sbjct: 1648 IEYPRDRLLYMMQDSRARLLLTHSTVQQRLPIPDGLEALAVDQTQAWSANDDSAPEVVLD 1707

Query: 116  LDSCQLSLCTSGSSGEPKRINKTLRQLANEVEALETLWGPDLKDACIIGSVATQHIYGLL 175
             D+    + TSGS+G PK +  +   L   + A    +     D  +       H     
Sbjct: 1708 GDNLAYVIYTSGSTGMPKGVAVSHGPLVAHIIATGERYETSPADCEL-------HFMSFA 1760

Query: 176  FRV-----LWPLCAGRTFVRKQ--LAFPE-DLQRASREHTHFAWVASPALLKRMGDNLDW 227
            F       + PL  G + + +   L  PE   Q+  R H   A V  P  L+++ ++ + 
Sbjct: 1761 FDGSHEGWMHPLINGASVLIRDDSLWLPEYTYQQMHRHHVTMA-VFPPVYLQQLAEHAER 1819

Query: 228  PALSQVSRVFSSGGALPVEAAGSLYDRLQQ--------WPTE------------------ 261
                   RV+  GG    +A+  L  R  +         PTE                  
Sbjct: 1820 DGNPPKVRVYCFGGDAVAQASYDLAWRALKPTYLFNGYGPTETVVTPLLWKARKGDPCGA 1879

Query: 262  -------ILGSSETGGIAWRQGAQPWQPFADVHLSQDADGALRIASPYL----------- 303
                   +LG+     +  +   QP     +++L  +      +  P L           
Sbjct: 1880 VYAPIGTLLGNRSGYVLDAQLNLQPIGVAGELYLGGEGVARGYLERPALTAERFVPDPFG 1939

Query: 304  -PEGHIEQTADAARIHADGRFELLGRLDRIVKLEEKRISLPMLEHALMTHPWVAETRLGV 362
             P   + ++ D  R   DG  + LGR+D  VK+   RI L  +E  L     V ET + V
Sbjct: 1940 KPGSRVYRSGDLTRGRPDGGVDYLGRVDHQVKIRGFRIELGEIEARLREQDSVGET-VVV 1998

Query: 363  VQENRA--SLGALVVLSDEGLHALRNQGRRTLTQTLRQHLSQHCEALALPRRWRLLRQLP 420
             QE  +   L A VV  D  L       + T  + LR+ L        +P     L ++P
Sbjct: 1999 AQEGPSGKQLVAYVVPLDP-LLIDDAVAQSTCREALRRALKARLPDYMVPTHLMFLERMP 2057

Query: 421  LNSQGKL 427
            L   GKL
Sbjct: 2058 LTPNGKL 2064



 Score = 28.5 bits (62), Expect = 0.005
 Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 23/115 (20%)

Query: 31  WAQSLSLAAGLQARGI----------QRLAVYLEDAGLLAIALLGAWRAGVSVLLPADLQ 80
           +A  +SL A L+A G           +RL   L+D+G+  +      R  +   LPADL 
Sbjct: 564 FAMVVSLLAVLKAGGAYVPLDPEYPRERLVHMLDDSGVRLVLTQSHLRDRLP--LPADL- 620

Query: 81  PQTRQRWDAAVDAWLTEAADLDALFQTPLSPAALDLDSCQLSLCTSGSSGEPKRI 135
                    A+D  L +A         P  P A +  S    + TSGS+G+PK +
Sbjct: 621 --------TALDIDLADAQLAQCAEHNP--PTAFEPRSLAYVIYTSGSTGKPKGV 665