Pairwise Alignments

Query, 556 a.a., AMP-binding protein from Pseudomonas simiae WCS417

Subject, 4679 a.a., peptide synthase from Pseudomonas simiae WCS417

 Score = 77.0 bits (188), Expect = 2e-17
 Identities = 120/501 (23%), Positives = 194/501 (38%), Gaps = 101/501 (20%)

Query: 6   LEHLLLEPLEQRP-----VTTEPAMDHAQLWAQSLSLAAGLQARGIQR---LAVYLEDAG 57
           + HL+ + ++  P     V     + +AQL A++  LA  L+ +G+     + + +E + 
Sbjct: 513 IHHLVEDQVQATPDAPALVFGTTTLTYAQLDARANQLAHALREKGVAPDVLVGICIERSI 572

Query: 58  LLAIALLGAWRAGVSVLLPADLQ-PQTRQRW---DAAVDAWLTEAADLDALFQTPLSPAA 113
            + + LL   +AG    +P D + PQ R  +   D+ +   L++ + L  L    +   A
Sbjct: 573 EMVVGLLAILKAG-GAYVPLDPEYPQERLAYMIEDSGIQLLLSQHSLLPVLPVEGIQVIA 631

Query: 114 LD----------LDSCQLSL---------CTSGSSGEPKRINKTLRQLANEVEALETLWG 154
           LD           +S  +SL          TSGS+G+PK    + R L N +  ++  +G
Sbjct: 632 LDQPASWLDGYSAESANVSLHALNLAYVIYTSGSTGKPKGAGNSHRALVNRLCWMQQAYG 691

Query: 155 PDLKDACIIGSVATQHIYGLLFRVLWPLCAGRTFV-------RKQLAFPEDLQRASREHT 207
            D +DA +  +  +  +   ++   WPL  G   V       R+     E + R      
Sbjct: 692 LDARDAVLQKTPFSFDV--SVWEFFWPLMTGARLVVAAPGEHREPARLIETIGRHGITTL 749

Query: 208 HFAWVASPALLKRMGDNLDWPALSQVSRVFSSGGALPVEAAGSLYDRLQQ-------WPT 260
           HF     P++L+         A + + R+  SG ALP++A   ++ +L Q        PT
Sbjct: 750 HFV----PSMLQAFIHEPGVQACTSLQRIVCSGEALPLDAQLQVFAKLPQAGLFNLYGPT 805

Query: 261 EILGSSETGGIAWRQGAQP---WQPFADV------------------------------- 286
           E      T      +GA      +P A++                               
Sbjct: 806 E-AAIDVTHWTCVDEGADSVPIGRPIANLGTYVLDAQLNPVPAGVSGELYLGGIGLARSY 864

Query: 287 HLSQDADGALRIASPYLPEGHIEQTADAARIHADGRFELLGRLDRIVKLEEKRISLPMLE 346
           H          + SP+     + +T D  R  ADG  E LGRLD  VKL   RI L  +E
Sbjct: 865 HRRPALTAERFVPSPFGDGARLYRTGDRVRQRADGVIEYLGRLDHQVKLRGLRIELGEIE 924

Query: 347 HALMTHPWVAETRLGVVQENRASLGALVVLSDEGLHALRNQGRRTLTQTLRQHLSQHCEA 406
             LM HP V E    V+ +    L A +VL D            T    L+  L      
Sbjct: 925 TRLMQHPSVREA--VVLVQGGKQLVAYLVLED------------TAPVDLKAWLLSSLPE 970

Query: 407 LALPRRWRLLRQLPLNSQGKL 427
             +P     L +LP+ + GKL
Sbjct: 971 YMVPSHMVPLAKLPVTANGKL 991



 Score = 48.9 bits (115), Expect = 4e-09
 Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 8/125 (6%)

Query: 303  LPEGHIEQTADAARIHADGRFELLGRLDRIVKLEEKRISLPMLEHALMTHPWVAETRLGV 362
            +P   + ++ D AR +  G  E +GR+D  VK+   R+ +  +E +L   P + E  + +
Sbjct: 2364 VPGARLYRSGDLARYNEAGALEYVGRIDHQVKIRGFRVEMGEIEASLQALPSLREAAV-I 2422

Query: 363  VQENRASLGALVVLSDEGLHALRNQGRRTLTQTLRQHLSQHCEALALPRRWRLLRQLPLN 422
             Q +      +  +       L  Q    L  TLRQ L  +     +P +W +L  LPLN
Sbjct: 2423 AQPSATGTQLVAYVVPVTAQTLDPQ---ALAATLRQSLPDY----MVPGQWVILEALPLN 2475

Query: 423  SQGKL 427
            + GKL
Sbjct: 2476 NNGKL 2480



 Score = 45.8 bits (107), Expect = 4e-08
 Identities = 110/521 (21%), Positives = 185/521 (35%), Gaps = 95/521 (18%)

Query: 25   MDHAQLWAQSLSLAAGLQARGIQ---RLAVYLEDAGLLAIALLGAWRAGVSVLLPADLQ- 80
            + + +L  Q+  LA  L ARG+    R+A+ +  +  + +A L   +AG  V +P D++ 
Sbjct: 4097 LSYGELDRQANRLAHALIARGVGPDVRVAIAMPRSAEIMVAFLAVMKAG-GVYVPLDIEY 4155

Query: 81   PQTRQRW---DAAVDAWLTEAADLDAL-------------------FQTPLSPAALDLDS 118
            P+ R  +   D+     LT    L  L                   F        L  D+
Sbjct: 4156 PRDRLLYMMQDSRAQLLLTHTRALQQLPIPDGLDSLAIDRTEEWAGFSDTAPQVKLGGDN 4215

Query: 119  CQLSLCTSGSSGEPKRINKTLRQLANEVEALETLWGPDLKDACIIGSVATQHIYGLLFRV 178
                + TSGS+G PK +  +   L   + A    +     D  +       H     F  
Sbjct: 4216 LAYVIYTSGSTGMPKGVAVSHGPLVAHIIATGERYETSPADCEL-------HFMSFAFDG 4268

Query: 179  -----LWPLCAGRTFVRKQ--LAFPE-DLQRASREHTHFAWVASPALLKRMGDNLDWPAL 230
                 + PL  G + + +   L  PE   Q+  R H   A V  P  L+++ ++ +    
Sbjct: 4269 SHEGWMHPLINGASVLIRDDSLWLPEYTYQQMHRHHVTMA-VFPPVYLQQLAEHAERDGN 4327

Query: 231  SQVSRVFSSGGALPVEAAGSLYDRLQQ--------WPTE--------------------- 261
                RV+  GG    +A+  L  R  +         PTE                     
Sbjct: 4328 PPKVRVYCFGGDAVAQASYDLAWRALKPTYLFNGYGPTETVVTPLLWKARKGDPCGAVYA 4387

Query: 262  ----ILGSSETGGIAWRQGAQPWQPFADVHLSQDADGALRIASPYL------------PE 305
                +LG+     +  +   QP     +++L  +      +  P L            P 
Sbjct: 4388 PIGTLLGNRSGYVLDAQLNLQPIGVAGELYLGGEGVARGYLERPALTAERFVPDPFGKPG 4447

Query: 306  GHIEQTADAARIHADGRFELLGRLDRIVKLEEKRISLPMLEHALMTHPWVAETRLGVVQE 365
              + ++ D  R   DG  + LG +   VK+   RI L  +E  L     V ET +   + 
Sbjct: 4448 SRVYRSGDLTRGRPDGGVDYLGSVAHQVKIRGFRIELGEIEARLREQDNVGETVVVAHEG 4507

Query: 366  NRASLGALVVLSDEGLHALRNQGRRTLTQTLRQHLSQHCEALALPRRWRLLRQLPLNSQG 425
                     V+  + L A   + R +L + L+ HL  +     +P  +  L Q+PL   G
Sbjct: 4508 PTGKQLVAYVVPADTLLADETEFRDSLRRALKTHLPDY----MVPTHFMFLAQMPLTPNG 4563

Query: 426  KLPQ---AQVEGLLLASRPKAPEVLEQVEANGEWTLQLSVP 463
            KL +    + +  LL     APE   + +    W   L +P
Sbjct: 4564 KLDRKGLPEPDASLLQQAYVAPETELEQQIAAIWADVLRLP 4604



 Score = 45.4 bits (106), Expect = 5e-08
 Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 18/170 (10%)

Query: 298  IASPY-LPEGHIEQTADAARIHADGRFELLGRLDRIVKLEEKRISLPMLEHALMTHPWVA 356
            + +PY  P   + +T D AR  ADG  E +GR+D  VK+   RI L  +E  L     + 
Sbjct: 3393 VPNPYGAPGERLYRTGDLARYRADGVVEYIGRVDHQVKVRGFRIELGEVEACLREQAGIR 3452

Query: 357  ETRLGVVQENRASLGALVVLSDEGLHALRNQGRRTLTQTLRQHLSQHCEALALPRRWRLL 416
            E              A+V+  ++ L A          +  +  L +      +P     L
Sbjct: 3453 E--------------AVVLADNDRLIAYLVSSAPDAPEVYKAALRERLPDYMVPAHLMFL 3498

Query: 417  RQLPLNSQGKLPQ---AQVEGLLLASRPKAPEVLEQVEANGEWTLQLSVP 463
              LPL   GKL +     V+  LL +   AP    + +    W   L +P
Sbjct: 3499 DSLPLTPNGKLDRKALPAVDAALLRTGHVAPVTPREQQVAAIWADVLDLP 3548