Pairwise Alignments

Query, 196 a.a., RNA polymerase sigma factor SigX from Pseudomonas simiae WCS417

Subject, 192 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 62.8 bits (151), Expect = 4e-15
 Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 12/164 (7%)

Query: 35  AYEELMRRYQRTLFNVCSRYLGNDRDADDVCQEVMLKVLYGLKNFE-GKSKFKTWLYSIT 93
           A  E++ R    L  + SR LG+  +A DV QE  L++     ++  G+++F TWL+ + 
Sbjct: 21  AVNEMVTRKLPRLLALASRILGDADEAKDVAQESFLRIWRQAASWRSGEARFDTWLHRVA 80

Query: 94  YNECITQYRKERRKRRLMDALSLDPLEEASEEKAPAPEEKGGLDR------WLVYVNPID 147
            N C      +R +RR    LS + + E ++  AP  E+    DR       L  +    
Sbjct: 81  LNLC-----HDRLRRRKQRPLSEEEVLELADSAAPLDEQLESADRSARMAAALAALPERQ 135

Query: 148 REILVLRFVAELEFQEIADIMHMGLSATKMRYKRALDKLREKFA 191
           RE +VL++  EL   + A +M++ + A +    RA  +LR + A
Sbjct: 136 REAIVLQYYQELSNIDAAALMNISVEALESLLSRARRQLRSQLA 179