Pairwise Alignments

Query, 196 a.a., RNA polymerase sigma factor SigX from Pseudomonas simiae WCS417

Subject, 196 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 92.4 bits (228), Expect = 5e-24
 Identities = 51/172 (29%), Positives = 96/172 (55%), Gaps = 11/172 (6%)

Query: 19  EELVARSHTELFHVTRAYEELMRRYQRTLFNVCSRYLGNDRDADDVCQEVMLKVLYGLKN 78
           E++V  + ++LF +      L  RY   ++N C  ++ +  +A D+  ++ +K+ + LK 
Sbjct: 24  EQVVKNNDSKLFGI------LYDRYSNIVYNKCLSFVKSKDEAQDLTHDIFIKLFFQLKK 77

Query: 79  FEGKSKFKTWLYSITYNECIT----QYRKERRKRRLMDALSLDPLEEASEEKAPAPEEKG 134
           F+G +KF TWLYS TYN C+     +Y+K++   + +D L   P EE  + +    + + 
Sbjct: 78  FKGDAKFSTWLYSFTYNFCVNYVQRKYQKKKETFQRLDDLQHHPYEEIDDSEIYKMQAE- 136

Query: 135 GLDRWLVYVNPIDREILVLRFVAELEFQEIADIMHMGLSATKMRYKRALDKL 186
            L R L  ++P D+ +L+++++  +  +EI   + +G SA KMR  RA  +L
Sbjct: 137 RLQRSLQSLDPNDKMVLLMKYMDGMSHKEIQQSIGVGESAVKMRINRAKQRL 188