Pairwise Alignments

Query, 196 a.a., RNA polymerase sigma factor SigX from Pseudomonas simiae WCS417

Subject, 192 a.a., Sigma-24 from Alteromonas macleodii MIT1002

 Score = 66.2 bits (160), Expect = 3e-16
 Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 13/182 (7%)

Query: 15  ELSDEELVARSHTELFHVTRAYEELMRRYQRTLFNVCSRYLGNDRDADDVCQEVMLKVLY 74
           +++D++LV +          A+  L+ RYQ  + ++ SRY+ N  D  DV QE  +K   
Sbjct: 4   QITDQQLVEKVQRG---DKNAFNLLVTRYQHKVMHLVSRYVKNTGDVADVTQEAFIKAYR 60

Query: 75  GLKNFEGKSKFKTWLYSITYNECITQYRKERRKRRL--MDALSLDPLEEASEEKAPAPEE 132
            L NF G S F TWLY I  N        + RK     +DA   D  E +   K  +  E
Sbjct: 61  ALPNFRGDSAFYTWLYRIAVNSAKNYLVSQGRKPPASDVDADEADFYEGSDALKEQSTPE 120

Query: 133 KGGLDRWL-------VYVNPID-REILVLRFVAELEFQEIADIMHMGLSATKMRYKRALD 184
           +  L   +       V   P D R  + LR +  L ++EIA++M   +   + R  RA +
Sbjct: 121 RSLLSEEIEETLFKVVEKLPDDLRMAITLREIEGLSYEEIANVMSCPVGTVRSRIFRARE 180

Query: 185 KL 186
            +
Sbjct: 181 AI 182