Pairwise Alignments

Query, 196 a.a., RNA polymerase sigma factor SigX from Pseudomonas simiae WCS417

Subject, 180 a.a., RNA polymerase sigma factor from Agrobacterium fabrum C58

 Score = 63.5 bits (153), Expect = 2e-15
 Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 5/157 (3%)

Query: 34  RAYEELMRRYQRTLFNVCSRYLGNDRDADDVCQEVMLKVLYGLKNF-EGKSKFKTWLYSI 92
           RA   L+      +  + +R LG+  +A+DV QE  L++      + +G ++F TW++ +
Sbjct: 19  RAMRTLVEAKLPRIMALATRMLGDPVEAEDVAQETFLRIWKHAGTWRQGAARFDTWIHRV 78

Query: 93  TYNECITQYRKERRKRRLMDALSLDPLEEASEEKAPAPEEKGGLDRWLVYVNPIDREILV 152
             N C  + RK RR+  +     L     +SE      +E   + R L  +    RE ++
Sbjct: 79  ALNLCYDRLRK-RREISVAQPSDLADARTSSENGGADIDEGEAVGRALSLIPERQREAII 137

Query: 153 LRFVAELEFQEIADIMHMGLSATK---MRYKRALDKL 186
           L +  E+  +E ADIMH+ + A +    R +RAL K+
Sbjct: 138 LVYYQEMSNREAADIMHVSVDALESLLSRGRRALQKI 174