Pairwise Alignments

Query, 408 a.a., Nitrate-binding regulatory protein (nasS) (from data) from Pseudomonas simiae WCS417

Subject, 399 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 35/263 (13%)

Query: 21  DAPEKSSLDLGFMALSDCASMVVAATQGFAQPYGLTLNLK-RQTSWANLRDKLVSGELDA 79
           DAP +    +G++ ++D   ++VA   G  +  G+         SWA + +  +SG+++ 
Sbjct: 41  DAPVR----IGYLPITDATPLLVAHNNGLFEAEGIKAERPVLLRSWAQVIEAFISGQVNV 96

Query: 80  AHSLYGLIYAVHLGIGGVAPTDMAVLMGLNQNGQSINLSRGLQQQGVITPEALDRHVHQS 139
            H L  +   V    G   P   A ++  N  G S     GL     + P   D  V Q 
Sbjct: 97  IHLLSPM--TVWARYGSKVP---AKVVAWNHVGGS-----GL----TVAPGITD--VKQL 140

Query: 140 RTKLTFAQTFPTGTHAMWLYYWLASQGIHPL----------QDVDSVVVPPPQMVAHLQA 189
             K + A  F    H + +       G+ P+           +V+ +V+PP  M   L +
Sbjct: 141 GGK-SVAIPFWYSIHNVVVQQLFRDNGLTPVARAAGSVIAANEVNLIVLPPSDMPPALAS 199

Query: 190 GRIDGFCVGEPWCASAVKQNQGFTLATTQAIWPDHPEKVLGCTQAFVDQYPNTARVLVMA 249
            RIDG+ V EP+ A A     G     T  +W +H   V+   +  +   P  ++ +V A
Sbjct: 200 QRIDGYIVAEPFNALAENLKVGRVQRFTGDVWRNHACCVVFMHEHDLANRPQWSQKVVNA 259

Query: 250 ILEASRFIEESSENRRSTAQLLS 272
           I++A  +   + +NR    +LLS
Sbjct: 260 IVKAQVW---TRDNREEAVKLLS 279