Pairwise Alignments

Query, 408 a.a., Nitrate-binding regulatory protein (nasS) (from data) from Pseudomonas simiae WCS417

Subject, 470 a.a., nitrate ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score =  200 bits (509), Expect = 6e-56
 Identities = 141/431 (32%), Positives = 213/431 (49%), Gaps = 53/431 (12%)

Query: 14  LAWVNGSDAP----EKSSLDLGFMALSDCASMVVAATQGFAQPYGLTLNLKRQTSWANLR 69
           LA  +G++A     EK  L LGF+ L+D A + +A  +GF +  GL + L+ Q +W  L 
Sbjct: 28  LALPHGAEAAKLKLEKDELKLGFIKLTDMAPLAIAKEKGFFEDEGLFVTLEPQANWKVLL 87

Query: 70  DKLVSGELDAAHSLYGLIYAVHLGIGGVAPTDMAVLMGLNQNGQSIN----------LSR 119
           D+++SGELD AH L G      +G G  A    A  M LN NG +++          L +
Sbjct: 88  DRVISGELDGAHMLAGQPIGATIGYGTQAHVVTAFSMDLNGNGITVSNEVWEAMKPHLPK 147

Query: 120 GLQQQGV--ITPEALDRHVHQSRTK---LTFAQTFPTGTHAMWLYYWLASQGIHP----- 169
           G   +    I  +AL + V   + +         FP  TH   L YWLAS GI+P     
Sbjct: 148 GPDGKIAHPIKADALKKVVDAMKAQGKSFNMGMVFPVSTHNYELRYWLASGGINPGYYSP 207

Query: 170 -------LQDVDSVVVPPPQMVAHLQAGRIDGFCVGEPWCASAVKQNQGFTLATTQAIWP 222
                    D    V PPPQM A L+AG I G+ VGEPW  +AV +  G  + T   IW 
Sbjct: 208 DNVSGQIAADALLSVTPPPQMPATLEAGTISGYSVGEPWNQAAVFKGIGVPVITDYEIWK 267

Query: 223 DHPEKVLGCTQAFVDQYPNTARVLVMAILEASRFIEESSE-NRRSTAQLLSGREYLDAPL 281
           ++PEKV G   A+ ++YPNT   +V A++ A ++++E++  NR    ++L+  EY+ A  
Sbjct: 268 NNPEKVFGVNNAWAEKYPNTHLAVVKALIRAGKWLDENNNANRDEAVKILAKSEYVGADA 327

Query: 282 DCIEPRLLGTYDDGLGNHWQDPH---ALRFFADGEVNLPYLSDGMWFMTQFRRWGLLRE- 337
             I   + GT++   G+    P      R+FA      P+ SD +W+++Q RRWG + E 
Sbjct: 328 KVIANSMTGTFEYEKGDKRAVPDFNVFYRYFA----TYPFYSDAVWYLSQMRRWGQIAEA 383

Query: 338 --DPDYLGVARQVQQLPLYRQAAAAL---GIATKHP--------DMRSSQLIDGKVWDGS 384
             D  Y  +A++V +  +Y +AA  L   G   K             +++ IDG  +DG 
Sbjct: 384 KPDAWYADMAKKVYKPDVYLKAAKLLLDEGKVAKEDFPWDSDGYRAPTAEFIDGISYDGK 443

Query: 385 DPADYARSFRL 395
            P DY + F +
Sbjct: 444 KPNDYLKKFTI 454