Pairwise Alignments

Query, 408 a.a., Nitrate-binding regulatory protein (nasS) (from data) from Pseudomonas simiae WCS417

Subject, 429 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  446 bits (1147), Expect = e-130
 Identities = 216/384 (56%), Positives = 280/384 (72%), Gaps = 3/384 (0%)

Query: 15  AWVNGSDAPEKSSLDLGFMALSDCASMVVAATQGFAQPYGLTLNLKRQTSWANLRDKLVS 74
           AW  GSDAPEK+ + +GF+ L+DCAS+V+A+ +GF + YG+T+   ++ SWA +RDKLVS
Sbjct: 42  AWAAGSDAPEKNEVRIGFIPLTDCASVVMASVKGFDKKYGITIVPSKEASWAAVRDKLVS 101

Query: 75  GELDAAHSLYGLIYAVHLGIGGVAPTDMAVLMGLNQNGQSINLSRGLQQQGVITPEALDR 134
           GELDAAH LYGL+Y +  G  G    +MA LM LN NGQ+I LS  L++ GV    +L R
Sbjct: 102 GELDAAHVLYGLLYGLQAGAAG-PQHNMAALMTLNNNGQAITLSNKLREAGVSDAASLKR 160

Query: 135 HVHQSRT-KLTFAQTFPTGTHAMWLYYWLASQGIHPLQDVDSVVVPPPQMVAHLQAGRID 193
            +  S     TFAQTFPTGTHAMWLYYWL + GI+P  DV +VVVPPPQMV +++ G + 
Sbjct: 161 FIAASPAGTYTFAQTFPTGTHAMWLYYWLGAAGINPFDDVRTVVVPPPQMVVNMKIGNMS 220

Query: 194 GFCVGEPWCASAVKQNQGFTLATTQAIWPDHPEKVLGCTQAFVDQYPNTARVLVMAILEA 253
           GFCVGEPW   A+    GFT AT+Q IWPDHPEKVLG T  +V+  PNTAR L  A+L+A
Sbjct: 221 GFCVGEPWNQRAITDGLGFTAATSQDIWPDHPEKVLGTTAEWVNANPNTARALTAAVLDA 280

Query: 254 SRFIEESSENRRSTAQLLSGREYLDAPLDCIEPRLLGTYDDGLGNHWQDPHALRFFADGE 313
           SR+I+ S +NRR TA++++GR Y++   + I  R+LG YD+G G  WQD HA+RF+  GE
Sbjct: 281 SRWIDSSDDNRRETARVIAGRAYVNTQEETIVGRMLGQYDNGAGKRWQDAHAMRFYHAGE 340

Query: 314 VNLPYLSDGMWFMTQFRRWGLLREDPDYLGVARQVQQLPLYRQAAAALG-IATKHPDMRS 372
           VN PYLSDGMWF+TQ +RWGLL ++PDY  VARQV ++ +Y+QAA+A+G +     +MRS
Sbjct: 341 VNFPYLSDGMWFLTQHKRWGLLAQEPDYQAVARQVNRIDIYKQAASAVGNVPLPSGEMRS 400

Query: 373 SQLIDGKVWDGSDPADYARSFRLH 396
           S LIDGK WDGSDPA YA SF ++
Sbjct: 401 SVLIDGKRWDGSDPAGYANSFSVN 424