Pairwise Alignments

Query, 408 a.a., Nitrate-binding regulatory protein (nasS) (from data) from Pseudomonas simiae WCS417

Subject, 430 a.a., nitrate ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  228 bits (582), Expect = 2e-64
 Identities = 131/388 (33%), Positives = 204/388 (52%), Gaps = 14/388 (3%)

Query: 23  PEKSSLDLGFMALSDCASMVVAATQGFAQPYGLT-LNLKRQTSWANLRDKLVSGE----L 77
           PE     LGF+AL+D A +++AA +G    +G+  + + +Q SW   RD LV G     +
Sbjct: 42  PEVKGAKLGFIALTDAAPLIIAAEKGLFAKHGMPEVEVLKQASWGATRDNLVLGGASNGI 101

Query: 78  DAAHSLYGLIYAVHLG--IGGVAPTDMAVLMGLNQNGQSINLSRGLQQQGVITPEALDRH 135
           D AH L  + Y +H G       P  M +L  LN + Q I++++   + GV    +  + 
Sbjct: 102 DGAHILTPMPYLMHTGKVTQNNVPVPMTILARLNLDSQGISVAKEYAETGVQLDASKLKA 161

Query: 136 VHQSRT----KLTFAQTFPTGTHAMWLYYWLASQGIHPLQDVDSVVVPPPQMVAHLQAGR 191
             + +     ++  A TFP GTH +W+ YWLA+ GI P +DV ++VVPPPQMVA+++ G 
Sbjct: 162 AFEKKKADGKEIKAAMTFPGGTHDLWIRYWLAAGGIDPDKDVSTIVVPPPQMVANMKVGN 221

Query: 192 IDGFCVGEPWCASAVKQNQGFTLATTQAIWPDHPEKVLGCTQAFVDQYPNTARVLVMAIL 251
           +D FCVGEPW    V Q  GFT  TT  +W  HPEK LG    +V++ PN  + L+MA++
Sbjct: 222 MDVFCVGEPWNEQLVNQGIGFTACTTGELWKGHPEKALGMRADWVEKNPNATKALLMAVM 281

Query: 252 EASRFIEESSENRRSTAQLLSGREYLDAPLDCIEPRLLGTYDDGLGNHWQDPHALRFFAD 311
           EA ++ +E + N+   + +L  R++ + P   +  RL G  + G G   ++      F  
Sbjct: 282 EAQQWCDEMA-NKEEMSTILGKRQWFNVPPKDVLGRLKGNINYGNGRVLENTGLQMKFWQ 340

Query: 312 GEVNLPYLSDGMWFMTQFRRWGLLREDPDYLGVARQVQQLPLYRQAAAALGIA--TKHPD 369
              + P+ S   WF+T+  RWG    D D   +  +V +  ++R AA  LG+A       
Sbjct: 341 DHASYPFHSHDSWFITENIRWGKFAPDTDVKALVAKVNREDIWRAAAKDLGVADLPASTS 400

Query: 370 MRSSQLIDGKVWDGSDPADYARSFRLHA 397
                  DGKV+D  +P+ Y  S  + A
Sbjct: 401 RGKETFFDGKVFDPENPSAYLESLSIKA 428