Pairwise Alignments

Query, 486 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas simiae WCS417

Subject, 477 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Dickeya dianthicola ME23

 Score =  141 bits (356), Expect = 4e-38
 Identities = 127/459 (27%), Positives = 217/459 (47%), Gaps = 36/459 (7%)

Query: 12  GLILPVAFSVSAAPVNTTLPPSVQQALTKAKMQNTALSLVMIPLNGPGTPTV-FNADVSV 70
           G    VA   +A P++           TK       L+LV+  + G  TPTV +++    
Sbjct: 9   GFSCAVALQANAVPIDE---------YTKYLPDGANLALVVQKI-GASTPTVDYHSQQMA 58

Query: 71  NPASTMKLVTTYAALEMLGPNHQWKTEFYTDGTLSGGVLHGNLYLKGGGDPKLNMEKLWL 130
            PAST K++T  AAL  LGP++++ T   + GTL+ GVL GNL ++  GDP L  ++L  
Sbjct: 59  LPASTQKVITALAALLQLGPDYRFVTTMESSGTLTNGVLRGNLAVRFSGDPSLKRQQLHN 118

Query: 131 LMRDLRANGVQQVTGDLVLDRSFF-NQPLLPEFNDDGNDENKPFLVKPDALLV-----NL 184
           ++++L+  G+++++GD+++D S F +    P +    ND  + F   P A +V     ++
Sbjct: 119 MVQELKKRGIREISGDVLIDTSVFASHDKAPGW--PWNDMTQCFSAPPAAAIVDKNCFSI 176

Query: 185 KALRFVTRNDSGRVLVSVEPPIASIRIDNQVKVSNAKQCTGDVRYNPVTAADGSVT-VTV 243
                    D+  + V+   P+         +V    + + D +Y  +    G ++  TV
Sbjct: 177 SLYSAPKAGDNAFIRVASYYPVQMFS-----EVRTLPKGSPDAQYCELDVVPGELSRFTV 231

Query: 244 SGQLADGCSS-QTYLSLLDHATYTAGAVRAIWKELGGTIQGRDIQAPVP-KDAKVLARAF 301
           +G L           ++ D A+Y    V+   ++    I G   +  +P     VLA+  
Sbjct: 232 TGCLTQRAEPLPLAFAIQDGASYAGAIVKDELQQADIRIAGSLRRQSLPGAHGTVLAQTE 291

Query: 302 SPDLAEIIRDINKYSNNTMAQQLFLSLGAQFRNDADGD---DAKAAQRVVRQWLAKKGIT 358
           S  L E++  + K S+N +A  +F ++G + R    G     A A ++++RQ   K GI 
Sbjct: 292 SEPLHELLTTMLKKSDNMIADTVFRTIGHE-RFKVPGTWRAGADAVRQILRQ---KAGID 347

Query: 359 APHLVMENGSGLSRAERVSAREMATMLQAAWKSPYAAEYISSMPITGTDGTMRKR--LKT 416
             + ++ +GSGLSR   ++   M  +LQ   +      YI  +P+ G DGT+R R  L  
Sbjct: 348 LGNTIIVDGSGLSRHNLIAPATMMQVLQYIAQHDNELNYIKMLPLAGYDGTLRYRAGLHE 407

Query: 417 TAMRGEAHVKTGTLNTVRAIAGFSRDNNGNTWAVVAILN 455
             + G+   KTG L  V  +AGF    +G   A V  L+
Sbjct: 408 AGLDGKVSAKTGALQGVYNLAGFITTASGQRMAFVQYLS 446