Pairwise Alignments

Query, 785 a.a., NAD-dependent DNA ligase LigA from Pseudomonas simiae WCS417

Subject, 566 a.a., DNA ligase B from Pseudomonas putida KT2440

 Score =  130 bits (326), Expect = 3e-34
 Identities = 146/592 (24%), Positives = 245/592 (41%), Gaps = 76/592 (12%)

Query: 4   AHTRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPDLVTRDSPTQRVG 63
           A   + +LRA L + +  YH      + D  YD+    L  L+          SP     
Sbjct: 31  AKAEVAQLRATLARWDEHYHRQGIALVADELYDQSHERLNHLQQ---CFAVGTSP----- 82

Query: 64  SAALSAFTQVKHEIPMLSLGNAFDETTMLEFDRRVTEGLDLPAGDLFGGGAAVEYSCEPK 123
           S   SA   V H +P   +    D   +  +    T             G  V+    PK
Sbjct: 83  SPLASARGPVPHPVPHTGVDKLADRQAVARWMTGKT-------------GVWVQ----PK 125

Query: 124 LDGLAVSLLYQDGELVRGATRGDGTTGEDISVNVRTVRNIPLKLHGSGWPANLEVRGEVF 183
           +DG+AVSL YQ G LV+  +RGDG  G D S ++  +  +  +L  +    +L ++GE++
Sbjct: 126 VDGVAVSLTYQQGRLVQLTSRGDGVHGHDWSRHIPQLGAVTRQLPEA---VDLHLQGELY 182

Query: 184 MSKAGFERLNASQLEVGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGVTTDISDTH 243
           +      RL+       G   AN R   AG L +          +    +G      +  
Sbjct: 183 L------RLDEHVQAKAGS--ANARGTVAGLLARKQLTGAQGNAIGLFVWGWPHG-PEQQ 233

Query: 244 IGNLQQLQKWGMPISRELKLAKGIQDCLEYYRDIGERRNSLPYEIDGVVFKVNSIASQRE 303
              L QL + G P S+   +A    +   ++R+   R ++LP+  DGV+ +  S      
Sbjct: 234 AERLAQLARLGFPDSQLYSIAIDTLEDAAHWREHWYR-SALPFATDGVILRQGSRPPAER 292

Query: 304 LGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNATLH 363
             ++A+ P W  A K+P  + L E+ DV F+VGRTG VTPV  ++PV +    ++  +L 
Sbjct: 293 --WQAKAPYWIAAWKYPYAQALAEVRDVRFRVGRTGRVTPVLHVQPVTLDDRRITQVSLG 350

Query: 364 NMDEVARLGVMIGDTVIIRRAGDVIPQVVSVV---LERRPENARAVPIPQSCPVCGSHVE 420
           ++    RL +  GD V I  AG  IP++  VV   +ER+P  A A P       C     
Sbjct: 351 SLARWQRLDIRPGDQVAISLAGLTIPRLEHVVHRAVERQPITAPA-PDQHHAHSCWQ--- 406

Query: 421 RTQLVKRSKGKETVSEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIDGLGDKTIEQLVD 480
                         SEG          C  Q    +     ++ + +   G  T  +LV+
Sbjct: 407 -------------ASEG----------CDEQFIARLTWLGGKQGLALPRTGPGTWRRLVE 443

Query: 481 EKLIGSPADLYKLKYEHIIDLEGFADISSKKLITAIENSKSPTLARFIYALGIPDVGEET 540
             L+ S  D  +L  E +    G + +++ +++ + + ++S    +++ ALG+P      
Sbjct: 444 AGLVTSMTDWLQLDAERLQQAPGISRLTATQMLGSFDQARSRPFDQWLRALGVPIGKHLP 503

Query: 541 AKVLARSLASLERVQKALPEVLTYLPDVGLEVAHEIHSFFEDSHNQDVIGAL 592
                ++LAS    Q         +P +G + + ++  FF  S  Q +   L
Sbjct: 504 LTGNWQALASRSAGQ------WQTVPGIGAKRSRQLVEFFAASEVQAIAAQL 549