Pairwise Alignments

Query, 785 a.a., NAD-dependent DNA ligase LigA from Pseudomonas simiae WCS417

Subject, 776 a.a., DNA ligase from Pseudomonas putida KT2440

 Score = 1205 bits (3118), Expect = 0.0
 Identities = 612/785 (77%), Positives = 686/785 (87%), Gaps = 14/785 (1%)

Query: 4   AHTRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPDLVTRDSPTQRVG 63
           A TRILELRAELDQHNYRY+VLDEPS+PDAEYDRLF+ELKALEAEHP LVT DSPTQRVG
Sbjct: 3   AETRILELRAELDQHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVG 62

Query: 64  SAALSAFTQVKHEIPMLSLGNAFDETTMLEFDRRVTEGLDLPAGDLFGGGAAVEYSCEPK 123
            AAL+AF+QV+HE+PMLSLGNAF+E  + EF RRV EGLD P         AV+YSCEPK
Sbjct: 63  GAALAAFSQVRHEVPMLSLGNAFEEADLREFGRRVVEGLDQPG--------AVDYSCEPK 114

Query: 124 LDGLAVSLLYQDGELVRGATRGDGTTGEDISVNVRTVRNIPLKLHGSGWPANLEVRGEVF 183
           LDGLAVSLLY+DG+LV+GATRGDGTTGEDIS NVRTVRNIPLKL G GWPA LEVRGEV+
Sbjct: 115 LDGLAVSLLYRDGQLVQGATRGDGTTGEDISANVRTVRNIPLKLQGKGWPAVLEVRGEVY 174

Query: 184 MSKAGFERLNASQLEVGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGV---TTDIS 240
           MSKAGF+RLNA+Q E GGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGV   +  I 
Sbjct: 175 MSKAGFDRLNAAQAEAGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGVGQVSESIG 234

Query: 241 DTHIGNLQQLQKWGMPISRELKLAKGIQDCLEYYRDIGERRNSLPYEIDGVVFKVNSIAS 300
           D+HIG L+QL+ WG+PISRELK A GI++CL YYRDIGERRNSLPYEIDGVVFKVNS+A+
Sbjct: 235 DSHIGILEQLKAWGLPISRELKHAAGIEECLAYYRDIGERRNSLPYEIDGVVFKVNSLAA 294

Query: 301 QRELGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNA 360
           QRELGFRAREPRWAIAHKFPAMEELTE+LDVEFQVGRTGAVTPVARLKPVKVAGVTVSNA
Sbjct: 295 QRELGFRAREPRWAIAHKFPAMEELTEVLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNA 354

Query: 361 TLHNMDEVARLGVMIGDTVIIRRAGDVIPQVVSVVLERRPENARAVPIPQSCPVCGSHVE 420
           TLHNMDE+ARLG+ IGDTVIIRRAGDVIPQV+ VVLERRP+ AR V +P +CPVCGS VE
Sbjct: 355 TLHNMDEIARLGLRIGDTVIIRRAGDVIPQVMQVVLERRPQGARPVEVPSACPVCGSQVE 414

Query: 421 RTQLVKRSKGKETVSEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIDGLGDKTIEQLVD 480
           RT+LVKRSKGKET SEGAVYRCVGRLACGAQLKQAIIH+VSRRAMDIDGLG+K++EQLVD
Sbjct: 415 RTRLVKRSKGKETTSEGAVYRCVGRLACGAQLKQAIIHYVSRRAMDIDGLGEKSVEQLVD 474

Query: 481 EKLIGSPADLYKLKYEHIIDLEGFADISSKKLITAIENSKSPTLARFIYALGIPDVGEET 540
           E LIGSPADLYKL++E ++ LEGFA++S++KL+ AIE SK P+LARFIYALGIPDVGEET
Sbjct: 475 EGLIGSPADLYKLQFEQVVGLEGFAEVSTQKLLDAIEASKRPSLARFIYALGIPDVGEET 534

Query: 541 AKVLARSLASLERVQKALPEVLTYLPDVGLEVAHEIHSFFEDSHNQDVIGALLSPEECGL 600
           AKVLARSL SL RVQ+ALP+VLTYLPD+GLEVA+EIH+FFED HNQ VI  LL   + G+
Sbjct: 535 AKVLARSLGSLARVQQALPQVLTYLPDIGLEVAYEIHNFFEDEHNQKVIQQLL---DSGM 591

Query: 601 QLQDQGDLSAEFAASTTLGGLLDKLHVPSVGPGAAQKLADKFVTLEGVIKADWLDMRQAL 660
           QLQD+G+L+AEFAASTTL G++ KL + SVGP  A+KL  +  +L+ +I AD +D+RQAL
Sbjct: 592 QLQDEGELAAEFAASTTLAGMIAKLDIASVGPTGAEKLVARLDSLDKIIAADGIDLRQAL 651

Query: 661 PEKQAKAVREFFDNADNAHRALAIEQQLKDFGMHWDSEKKVVEGLPEAGHTWVLTGSLEL 720
             KQA AVREFF +  N   A  IE QL  FGMHW SEKKV EGLP AG TWVLTG+LE 
Sbjct: 652 AAKQADAVREFFKDEANQKLARDIEAQLLAFGMHWSSEKKVAEGLPLAGQTWVLTGTLER 711

Query: 721 MSRDVAKEKLESLGAKVAGSVSAKTHCVVAGPGAGSKLTKASELGLKVLDEEAFVAFLAR 780
           MSRD+AK+KLESLGAKVAGSVS KTHCVVAGPGAGSKL KA+ELG+KVLDE+AFV FLA 
Sbjct: 712 MSRDIAKDKLESLGAKVAGSVSGKTHCVVAGPGAGSKLAKAAELGVKVLDEDAFVTFLAE 771

Query: 781 NNIKV 785
             I V
Sbjct: 772 QGIAV 776