Pairwise Alignments

Query, 785 a.a., NAD-dependent DNA ligase LigA from Pseudomonas simiae WCS417

Subject, 561 a.a., DNA ligase (EC 6.5.1.2), LigB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  118 bits (296), Expect = 8e-31
 Identities = 111/416 (26%), Positives = 185/416 (44%), Gaps = 44/416 (10%)

Query: 121 EPKLDGLAVSLLYQDGELVRGATRGDGTTGEDISVNVRTVRNIPLKLHGSGWPANLEVRG 180
           +PK+DG+AV+L+YQ+G+L R  +RG+G  GED +  +R + +IP    G+   AN  ++G
Sbjct: 123 QPKVDGVAVTLVYQNGKLTRAISRGNGLQGEDWTPKIRLIPSIPQTTQGA--LANAVLQG 180

Query: 181 EVFMSKAGFERLNASQLEVGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGVTTDIS 240
           E+F+ + G       Q  +GG    N R+  AG L + D+  +A   L    +    D  
Sbjct: 181 EIFLQREGH-----IQQRMGG---MNARSKVAGMLMRQDN-ASALNSLGIFIW-AWPDGP 230

Query: 241 DTHIGNLQQLQKWGMPISRELKLAKGIQDCLEYYRDIGE-RRNSLPYEIDGVVFKV-NSI 298
                 L QL K G  ++ +  LA  ++D  E  R       ++LP+  DGVV ++    
Sbjct: 231 ANMPERLSQLAKAGFSLTNKYTLA--VKDASEVERARQSWLTSALPFVTDGVVIRMAKEP 288

Query: 299 ASQRELGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTVS 358
           ASQ    +R  +  W  A K+P + ++ ++  ++F VG++G +T VA L PV +    V 
Sbjct: 289 ASQH---WRPGQGDWLAAWKYPPVAQVAQVSAIQFSVGKSGKITVVASLVPVILDDKRVQ 345

Query: 359 NATLHNMDEVARLGVMIGDTVIIRRAGDVIPQVVSVVLERRPENARAVPIPQSCPVCGSH 418
              + ++       +  GD +++  AG  IP++  VV   R    R+ P+P       SH
Sbjct: 346 RVNIGSVKRWEAWDIAPGDQILVSLAGQGIPRLDEVVWRSR---ERSKPVPPD-----SH 397

Query: 419 VERTQLVKRSKGKETVSEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIDGLGDKTIEQL 478
                    S                   C  Q    +I   SR A+ +DG+G+ +   L
Sbjct: 398 FNSLTCFYAS-----------------ATCQEQFISRLIWLGSRSALGLDGMGEASWRAL 440

Query: 479 VDEKLIGSPADLYKLKYEHIIDLEGFADISSKKLITAIENSKSPTLARFIYALGIP 534
                         L    I +  GFA   S+++      ++     R+I A+ IP
Sbjct: 441 HQTHRFEHIFSWLTLTSAQIANTPGFAKGKSEQIWRQFNLARRQPFTRWIMAMDIP 496