Pairwise Alignments

Query, 319 a.a., transporter from Pseudomonas simiae WCS417

Subject, 298 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 96.7 bits (239), Expect = 6e-25
 Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 12/291 (4%)

Query: 6   PLKLTLVIASVILCWAYSPIGVHMGLLSYGPGQLALLRFLIASVFMAGVALVMGIGRPRL 65
           PL L     ++ + W  + + + +G+  + P  LA +RF  A   M G     G+  P  
Sbjct: 8   PLPLIAAFFALYVIWGSTYLVIRIGVEYWPPLLLAGIRFCTAGALMYGFLRWRGVPAPTW 67

Query: 66  --WDLPWLLVLSFFGVFLHHTSLNYGQQFVTAGASSVLAQSAPLFSVLIAFFCLKERVSL 123
             W    ++ L    V     S+      V++G +++   + PLF++L  +F       L
Sbjct: 68  PQWKAAGMIGLLLLTVGNGGVSVAE-HMGVSSGVAALAVATVPLFTLLCGYFWGARNTRL 126

Query: 124 WRWSCVLLGLLGVLVVIWGDHGVGNIDPRG-LLLLLAAVSWSLYFAIQKHYAHRYSPLTM 182
             W+ V+LG++G+ ++  G        P G +LLL+AA SW+      +        +  
Sbjct: 127 -EWAGVILGIIGIAMLNMGS--TLQSSPMGAVLLLVAAASWAFGSVWSRQLPLPQGAMAS 183

Query: 183 ACYMVWGGTLMLCVNLPGLSSAVVQA--PLPENLAVLVLGIFPSALAYLAWGYVLKHVEV 240
           A  M+  G  +L V+   LS   +QA  PL   LA+  L +F S +A+ A+ Y+LKHV  
Sbjct: 184 AAEMLVAGVALLMVS--ALSGERLQAVPPLEGWLALAYLTVFGSIIAFNAYMYLLKHVRP 241

Query: 241 SRASVAMYLIPPVAMMMAATLLGEHITLQVVLGGVIVLASVAAISLEGRWR 291
           + A+   Y+ P VA+++    +GE I L+  L  ++++++V  ISL  +WR
Sbjct: 242 AAATSYAYVNPAVAVLLGIVFVGETIGLEEALAMLVIISAVLLISLP-QWR 291