Pairwise Alignments

Query, 319 a.a., transporter from Pseudomonas simiae WCS417

Subject, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score = 90.1 bits (222), Expect = 6e-23
 Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 11/292 (3%)

Query: 1   MNTPSPLKLTLVIASVILCWAYSPIGVHMGLLSYGPGQLALLRFLIASVFMAGVALVMGI 60
           M++ S     + +A+V + W  + +       +  P   A LRF +AS+ + G   +  I
Sbjct: 1   MHSSSDRITYMKLAAVTMIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGFLGLARI 60

Query: 61  --GRPRLWDLPWLLVLSFFGVFLHHTSLNYGQQFVTAGASSVLAQSAPLFSVLIAFFCLK 118
              RP    L  L +L FFG+F ++    YG Q + A  +S++    P    L + +  K
Sbjct: 61  PLARPSPRQLLQLGMLGFFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFK 120

Query: 119 ERVSLWRWSCVLLGLLGVLVVIWGDH----GVGNIDPRGLLLLLAAV-SWSLYFAIQKHY 173
           ER+     + +LL L G  VVI   +           RG LL+   V  W +Y    +  
Sbjct: 121 ERLGASNVAGILLCLTGAAVVIVSRNPHVLNEATSSWRGDLLIFGCVVGWGIYSLFSRGL 180

Query: 174 AHRYSPLTMACYMVWGGTLMLCVNLPGLSSAVVQA----PLPENLAVLVLGIFPSALAYL 229
                PL    + +  GTLML +    +    ++A       + L++  LG+  SALAY+
Sbjct: 181 NQSLGPLQTVTWSILLGTLMLTLTTLIMGRFTLEAMGRLQTAQGLSLAYLGVLGSALAYI 240

Query: 230 AWGYVLKHVEVSRASVAMYLIPPVAMMMAATLLGEHITLQVVLGGVIVLASV 281
            +   ++ +  +R+ V + L P  A++  A LL E ++L +++GG ++L  +
Sbjct: 241 GYYDGIRRIGATRSGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGI 292



 Score = 36.2 bits (82), Expect = 1e-06
 Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 4/130 (3%)

Query: 158 LAAVS--WSLYFAIQKHYAHRYSPLTMACYMVWGGTLMLCVNLPGLSSAVVQAPLPENLA 215
           LAAV+  W   F   ++ +    PL  A       +L L +   GL+   +  P P  L 
Sbjct: 13  LAAVTMIWGGTFVAGRYLSGTVDPLLAASLRFALASLAL-LGFLGLARIPLARPSPRQLL 71

Query: 216 VL-VLGIFPSALAYLAWGYVLKHVEVSRASVAMYLIPPVAMMMAATLLGEHITLQVVLGG 274
            L +LG F      L + Y L+ +  SRAS+ + L P V  + +  L  E +    V G 
Sbjct: 72  QLGMLGFFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFKERLGASNVAGI 131

Query: 275 VIVLASVAAI 284
           ++ L   A +
Sbjct: 132 LLCLTGAAVV 141