Pairwise Alignments

Query, 319 a.a., transporter from Pseudomonas simiae WCS417

Subject, 298 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

 Score = 83.2 bits (204), Expect = 7e-21
 Identities = 70/293 (23%), Positives = 137/293 (46%), Gaps = 18/293 (6%)

Query: 17  ILCWAYSPIGVHMGLLSYGPGQLALLRFLIASVFMAGVAL--VMGIGRPRLWDLPWLLVL 74
           ++ W+ + +   M   +  P +++  R+L+A++    +AL  V+   R     L  + VL
Sbjct: 11  VVIWSGNTVVSKMAAGTIAPAEISFYRWLLAALLFTPLALRPVLRNWRAIRPQLGRIAVL 70

Query: 75  SFFGVFLHHTSLNYGQQFVTAGASSVLAQSAPLFSVLIAFFCLKERVSLWRWSCVLLGLL 134
              G+ ++ +   Y     TA    ++    P+  + ++   L +R++    +  L+ ++
Sbjct: 71  GLLGMVVYQSLAYYAAYLTTATHMGIIGSLTPMMVLALSIVLLGQRLTAGAVAGSLVSIM 130

Query: 135 GVLVVIW-GDHGV---GNIDPRGLLLLLAAVSWSLYFAIQKHYAHRYSPLTMACYM--VW 188
           GVLVV+  GD G       +    L+LLA +++++Y  + K +  +  P     Y+  V+
Sbjct: 131 GVLVVVSSGDLGTLLKSGANMGDGLMLLAMLAYAIYVILLKRWGMKGVPALQLLYLQIVF 190

Query: 189 GGTLMLCVNL--PGLSSAVVQAPLPENLAVLVLGIFPSALAYLAWGYVLKHVEVSRASVA 246
               +L + L  P +  +    PL     +   G+  S LA L W + + H+  SRAS+ 
Sbjct: 191 AVIALLPLYLLTPRMGLSAANLPL-----IGFAGLGASMLAPLVWMHTVAHIGPSRASMF 245

Query: 247 MYLIPPVAMMMAATLLGEHITLQVVLGGVIVLASVAAISLEGRWRSVAQAKRA 299
             LIP    ++AA ++GE +     +GGV+ +A V    L   W++  +  RA
Sbjct: 246 FNLIPLFTALIAAVVIGESLAAYHAIGGVLTVAGVLLAEL---WKAPLRRSRA 295